Whole-transcriptome analysis links trastuzumab sensitivity of breast tumors to both HER2 dependence and immune cell infiltration (Q36414012)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26334217%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

title

Whole-transcriptome analysis links trastuzumab sensitivity of breast tumors to both HER2 dependence and immune cell infiltration (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26334217%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

main subject

transcriptome

0 references

immune cell infiltration

1 reference

1 reference

1

1 reference

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23 February 2020

Loris De Cecco

2

1 reference

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23 February 2020

Marco Sandri

3

1 reference

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23 February 2020

Marta Giussani

5

1 reference

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23 February 2020

Biagio Paolini

6

1 reference

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23 February 2020

Andrea Balsari

10

1 reference

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23 February 2020

Serena Di Cosimo

14

1 reference

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23 February 2020

Elda Tagliabue

15

1 reference

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23 February 2020

author name string

Aleix Prat

4

1 reference

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23 February 2020

Marialuisa L Carcangiu

7

1 reference

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23 February 2020

Silvana Canevari

8

1 reference

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23 February 2020

Alberto Bottini

9

1 reference

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23 February 2020

Sylvie Menard

11

1 reference

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23 February 2020

Daniele Generali

12

1 reference

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23 February 2020

Manuela Campiglio

13

1 reference

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23 February 2020

language of work or name

English

0 references

publication date

1 September 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26334217%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

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23 February 2020

volume

6

1 reference

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23 February 2020

issue

29

1 reference

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23 February 2020

page(s)

28173-28182

1 reference

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Genomic analysis reveals that immune function genes are strongly linked to clinical outcome in the North Central Cancer Treatment Group n9831 Adjuvant Trastuzumab Trial.

23 February 2020

cites work

1 reference

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Trastuzumab plus adjuvant chemotherapy for human epidermal growth factor receptor 2-positive breast cancer: planned joint analysis of overall survival from NSABP B-31 and NCCTG N9831.

30 September 2017

1 reference

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Comprehensive gene expression meta-analysis of head and neck squamous cell carcinoma microarray data defines a robust survival predictor.

30 September 2017

1 reference

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Prospective neoadjuvant analysis of PET imaging and mechanisms of resistance to Trastuzumab shows role of HIF1 and autophagy.

30 September 2017

1 reference

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Predicting degree of benefit from adjuvant trastuzumab in NSABP trial B-31.

30 September 2017

1 reference

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Trastuzumab for patients with HER2 positive breast cancer: delivery, duration and combination therapies.

30 September 2017

1 reference

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Identifying subgroup markers in heterogeneous populations

30 September 2017

1 reference

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Identification and validation of a multigene predictor of recurrence in primary laryngeal cancer

30 September 2017

1 reference

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Effect of adjuvant trastuzumab treatment in conventional clinical setting: an observational retrospective multicenter Italian study

30 September 2017

1 reference

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Noncanonical roles of the immune system in eliciting oncogene addiction

30 September 2017

1 reference

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Therapeutic implications of estrogen receptor signaling in HER2-positive breast cancers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Trastuzumab containing regimens for early breast cancer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Anti-ErbB-2 mAb therapy requires type I and II interferons and synergizes with anti-PD-1 or anti-CD137 mAb therapy

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

SurvJamda: an R package to predict patients' survival and risk assessment using joint analysis of microarray gene expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

The therapeutic effect of anti-HER2/neu antibody depends on both innate and adaptive immunity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

T-cell metagene predicts a favorable prognosis in estrogen receptor-negative and HER2-positive breast cancers.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

lumi: a pipeline for processing Illumina microarray

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Quantitative expression profiling of highly degraded RNA from formalin-fixed, paraffin-embedded breast tumor biopsies by oligonucleotide microarrays.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Immunological aspects of cancer chemotherapy

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

pcaMethods--a bioconductor package providing PCA methods for incomplete data

30 September 2017

1 reference

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Adjusting batch effects in microarray expression data using empirical Bayes methods

30 September 2017

1 reference

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Bioconductor: open software development for computational biology and bioinformatics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Semi-supervised methods to predict patient survival from gene expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Time-dependent ROC curves for censored survival data and a diagnostic marker

30 September 2017

1 reference

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Tumor infiltrating lymphocytes are prognostic in triple negative breast cancer and predictive for trastuzumab benefit in early breast cancer: results from the FinHER trial

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Prognostic and predictive value of tumor-infiltrating lymphocytes in a phase III randomized adjuvant breast cancer trial in node-positive breast cancer comparing the addition of docetaxel to doxorubicin with doxorubicin-based chemotherapy: BIG 02-98

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

Research-Based PAM50 Subtype Predictor Identifies Higher Responses and Improved Survival Outcomes in HER2-Positive Breast Cancer in the NOAH Study

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4695052

TP53 genomics predict higher clinical and pathologic tumor response in operable early-stage breast cancer treated with docetaxel-capecitabine ± trastuzumab

5 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26334217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.18632/ONCOTARGET.4405

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26334217%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26334217%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference