An improved allele-specific PCR primer design method for SNP marker analysis and its application (Q36391841)

13 August 2017

An improved allele-specific PCR primer design method for SNP marker analysis and its application (English)

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13 August 2017

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Jing Liu

1

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13 August 2017

Shunmou Huang

2

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13 August 2017

Meiyu Sun

3

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13 August 2017

Shengyi Liu

4

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13 August 2017

Yumei Liu

5

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13 August 2017

Wanxing Wang

6

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13 August 2017

Xiurong Zhang

7

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13 August 2017

Hanzhong Wang

8

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13 August 2017

Wei Hua

9

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13 August 2017

24 August 2012

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13 August 2017

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13 August 2017

8

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13 August 2017

1

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13 August 2017

34

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https://scigraph.springernature.com/pub.10.1186/1746-4811-8-34

13 August 2017

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cites work

Maternal control of seed oil content in Brassica napus: the role of silique wall photosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Protocol: a simple gel-free method for SNP genotyping using allele-specific primers in rice and other plant species

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

SNP detection for massively parallel whole-genome resequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Simple allele-discriminating PCR for cost-effective and rapid genotyping and mapping

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

SOAP: short oligonucleotide alignment program

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Power to detect risk alleles using genome-wide tag SNP panels

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

WASP: a Web-based Allele-Specific PCR assay designing tool for detecting SNPs and mutations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

SNP discovery via 454 transcriptome sequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

High-throughput SNP genotyping on universal bead arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

MARA: a novel approach for highly multiplexed locus-specific SNP genotyping using high-density DNA oligonucleotide arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Whole genome DNA copy number changes identified by high density oligonucleotide arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Advanced sequencing technologies: methods and goals

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

SNP2CAPS: a SNP and INDEL analysis tool for CAPS marker development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Structure of linkage disequilibrium in plants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Progress in high throughput SNP genotyping methods

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Methods for genotyping single nucleotide polymorphisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Automation in genotyping of single nucleotide polymorphisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

High-throughput SNP genotyping by allele-specific PCR with universal energy-transfer-labeled primers

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Amplification-refractory mutation system (ARMS) analysis of point mutations.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Arabidopsis ribonucleotide reductases are critical for cell cycle progression, DNA damage repair, and plant development

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

Web-based primer design for single nucleotide polymorphism analysis.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

A guide to the design and use of mismatched and degenerate primers.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3495711

A simple procedure for the analysis of single nucleotide polymorphisms facilitates map-based cloning in Arabidopsis

21 September 2018

1 reference

12 December 2020

Towards fully automated genome-wide polymorphism screening

1 reference

12 December 2020

Mismatch amplification mutation assay (MAMA): application to the c-H-ras gene

1 reference

12 December 2020

Development of PCR-based SNP markers for rice blast resistance genes at the Piz locus

1 reference

12 December 2020

A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers

1 reference

12 December 2020

Identifiers

DOI

10.1186/1746-4811-8-34

1 reference

Dimensions Publication ID

13 August 2017

0 references

1 reference

13 August 2017

PubMed publication ID

22920499

1 reference