Computational modeling of the cell-autonomous mammalian circadian oscillator (Q36361684)

13 August 2017

Computational modeling of the cell-autonomous mammalian circadian oscillator (English)

1 reference

13 August 2017

0 references

Olga A Podkolodnaya

1

1 reference

PubMed ID

28466791

13 August 2017

Natalya N Tverdokhleb

series ordinal

2

1 reference

PubMed ID

28466791

13 August 2017

Nikolay L Podkolodnyy

series ordinal

3

1 reference

13 August 2017

24 February 2017

1 reference

13 August 2017

1 reference

13 August 2017

11

1 reference

13 August 2017

Suppl 1

1 reference

13 August 2017

379

1 reference

https://scigraph.springernature.com/pub.10.1186/s12918-016-0379-8

13 August 2017

0 references

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A Mathematical Model of the Liver Circadian Clock Linking Feeding and Fasting Cycles to Clock Function.

22 September 2018

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Period-independent novel circadian oscillators revealed by timed exercise and palatable meals.

22 September 2018

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Automated parameter estimation for biological models using Bayesian statistical model checking

22 September 2018

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A tunable artificial circadian clock in clock-defective mice.

22 September 2018

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Mining for novel candidate clock genes in the circadian regulatory network

22 September 2018

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Robust and efficient parameter estimation in dynamic models of biological systems

22 September 2018

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Ribosome profiling reveals the rhythmic liver translatome and circadian clock regulation by upstream open reading frames

22 September 2018

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A Period2 Phosphoswitch Regulates and Temperature Compensates Circadian Period

22 September 2018

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Circadian molecular clock in lung pathophysiology

22 September 2018

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Editorial: Therapeutic implications of circadian rhythms

22 September 2018

1 reference

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Ribosome profiling reveals an important role for translational control in circadian gene expression

22 September 2018

1 reference

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Multiscale modeling of tumor growth induced by circadian rhythm disruption in epithelial tissue

22 September 2018

1 reference

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Circadian systems biology: When time matters

22 September 2018

1 reference

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Validation and selection of ODE based systems biology models: how to arrive at more reliable decisions

22 September 2018

1 reference

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Identification of Circadian Determinants of Cancer Chronotherapy through In Vitro Chronopharmacology and Mathematical Modeling

22 September 2018

1 reference

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Distinct roles for GABA across multiple timescales in mammalian circadian timekeeping

22 September 2018

1 reference

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GABA-mediated repulsive coupling between circadian clock neurons in the SCN encodes seasonal time

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Cisplatin-based chronotherapy for advanced non-small cell lung cancer patients: a randomized controlled study and its pharmacokinetics analysis.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Coupling between the Circadian Clock and Cell Cycle Oscillators: Implication for Healthy Cells and Malignant Growth

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

RNA around the clock - regulation at the RNA level in biological timing

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian Clocks in the Immune System

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian Clock Gene CRY2 Degradation Is Involved in Chemoresistance of Colorectal Cancer.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modelling and analysis of the feeding regimen induced entrainment of hepatocyte circadian oscillators using petri nets

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Rhythmic degradation explains and unifies circadian transcriptome and proteome data

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A circadian gene expression atlas in mammals: implications for biology and medicine

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

The proteomic landscape of the suprachiasmatic nucleus clock reveals large-scale coordination of key biological processes.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Evaluation of five methods for genome-wide circadian gene identification

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A mammalian circadian clock model incorporating daytime expression elements

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modeling circadian clock-cell cycle interaction effects on cell population growth rates.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

An intensity ratio of interlocking loops determines circadian period length.

22 September 2018

1 reference

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Timing of circadian genes in mammalian tissues.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

It is not the parts, but how they interact that determines the behaviour of circadian rhythms across scales and organisms

22 September 2018

1 reference

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Circadian gene variants in cancer.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian regulation of gene expression: at the crossroads of transcriptional and post-transcriptional regulatory networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Molecular mechanisms that regulate the coupled period of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Online period estimation and determination of rhythmicity in circadian data, using the BioDare data infrastructure.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A novel protein, CHRONO, functions as a core component of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Effects of light, food, and methamphetamine on the circadian activity rhythm in mice.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Spatiotemporal separation of PER and CRY posttranslational regulation in the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

CLOCK:BMAL1 is a pioneer-like transcription factor

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

In-vivo quantitative proteomics reveals a key contribution of post-transcriptional mechanisms to the circadian regulation of liver metabolism.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Reverse engineering and identification in systems biology: strategies, perspectives and challenges

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A circadian clock transcription model for the personalization of cancer chronotherapy

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Combining the 'bottom up' and 'top down' approaches in pharmacokinetic modelling: fitting PBPK models to observed clinical data

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Causes and consequences of hyperexcitation in central clock neurons

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

The Goodwin model: behind the Hill function

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modeling and validating chronic pharmacological manipulation of circadian rhythms

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Critical phase shifts slow down circadian clock recovery: implications for jet lag.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Ultrasensitive response motifs: basic amplifiers in molecular signalling networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Cancer chronotherapeutics: experimental, theoretical, and clinical aspects

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Molecular components of the Mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Central control of peripheral circadian oscillators

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Nascent-Seq analysis of Drosophila cycling gene expression

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

SENSITIVITY ANALYSIS FOR OSCILLATING DYNAMICAL SYSTEMS.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian control of mRNA polyadenylation dynamics regulates rhythmic protein expression

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A mechanism for robust circadian timekeeping via stoichiometric balance

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

NCBI GEO: archive for functional genomics data sets--update

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

CircaDB: a database of mammalian circadian gene expression profiles

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Nascent-Seq reveals novel features of mouse circadian transcriptional regulation

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Cellular circadian clocks in mood disorders.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Cold-inducible RNA-binding protein modulates circadian gene expression posttranscriptionally

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Experimental design for parameter estimation of gene regulatory networks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Identification of small molecule activators of cryptochrome

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Entrainment of the mammalian cell cycle by the circadian clock: modeling two coupled cellular rhythms

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Central and peripheral circadian clocks in mammals

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Rev-erbα and Rev-erbβ coordinately protect the circadian clock and normal metabolic function

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

DNA microarray analysis and functional profile of pituitary transcriptome under core-clock protein BMAL1 control.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Tuning the mammalian circadian clock: robust synergy of two loops.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Structural identifiability of systems biology models: a critical comparison of methods

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A combined experimental and mathematical approach for molecular-based optimization of irinotecan circadian delivery

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian organization is governed by extra-SCN pacemakers

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Analyzing circadian expression data by harmonic regression based on autoregressive spectral estimation

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A scaling normalization method for differential expression analysis of RNA-seq data

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A role for the clock gene per1 in prostate cancer

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A model of the cell-autonomous mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Casein kinase 1 delta regulates the pace of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Recent developments in parameter estimation and structure identification of biochemical and genomic systems

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Systems biology: experimental design

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Systems biology: parameter estimation for biochemical models

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Analysis of gene regulatory networks in the mammalian circadian rhythm

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

The biology of the circadian Ck1epsilon tau mutation in mice and Syrian hamsters: a tale of two species

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modeling the circadian clock: from molecular mechanism to physiological disorders.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

High-resolution time course analysis of gene expression from pituitary

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Intercellular coupling confers robustness against mutations in the SCN circadian clock network

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Mathematical modeling of intracellular signaling pathways

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Molecular components of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian orchestration of the hepatic proteome

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Feedback repression is required for mammalian circadian clock function

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Robust detection of periodic time series measured from biological systems

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A model of the mammalian circadian oscillator including the REV-ERBalpha module.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

System-level identification of transcriptional circuits underlying mammalian circadian clocks

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Stochastic simulation of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

The orphan receptor Rev-erbalpha gene is a target of the circadian clock pacemaker

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modeling the mammalian circadian clock: sensitivity analysis and multiplicity of oscillatory mechanisms.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Model based conjectures on mammalian clock controversies.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Identifying periodically expressed transcripts in microarray time series data

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A detailed predictive model of the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Circadian rhythms and the circadian organization of living systems

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Toward a detailed computational model for the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Coordination of circadian timing in mammals

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A transcription factor response element for gene expression during circadian night

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Coordinated transcription of key pathways in the mouse by the circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Mechanisms of noise-resistance in genetic oscillators

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Extensive and divergent circadian gene expression in liver and heart

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Posttranslational mechanisms regulate the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Molecular analysis of mammalian circadian rhythms

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Interacting molecular loops in the mammalian circadian clock

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Modeling the molecular regulatory mechanism of circadian rhythms in Drosophila

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Mutagenesis and mapping of a mouse gene, Clock, essential for circadian behavior

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Oscillatory behavior in enzymatic control processes

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

Mathematics of cellular control processes I. Negative feedback to one gene

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5333193

A new look at the statistical model identification

22 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12918-016-0379-8

Inverse problems in systems biology

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12918-016-0379-8

Entrainment in a model of the mammalian circadian oscillator

21 January 2018

1 reference

12 December 2020

Photic induction of mPer1 and mPer2 in cry-deficient mice lacking a biological clock

1 reference

12 December 2020

Circadian clocks limited by noise

1 reference

12 December 2020

A systems theoretic approach to analysis and control of mammalian circadian dynamics

1 reference

12 December 2020

Involvement of circadian clock gene Clock in diabetes-induced circadian augmentation of plasminogen activator inhibitor-1 (PAI-1) expression in the mouse heart

1 reference

12 December 2020

10.1186/S12918-016-0379-8

Identifiers

DOI

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gfjmzpsnnfeghhxzkpfcmwrklm

30 July 2022

mapped directly with Wikidata item

DBLP publication ID

journals/bmcsb/PodkolodnayaTP17

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1083877863

0 references

Fatcat ID

release_gfjmzpsnnfeghhxzkpfcmwrklm

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gfjmzpsnnfeghhxzkpfcmwrklm

30 July 2022

mapped directly with Wikidata item

0 references

1 reference

https://api.fatcat.wiki/v0/release/gfjmzpsnnfeghhxzkpfcmwrklm

30 July 2022