Study of structure, base-pair opening kinetics and proton exchange mechanism of the d-(AATTGCAATT) self-complementary oligodeoxynucleotide in solution (Q36352493)

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English	Study of structure, base-pair opening kinetics and proton exchange mechanism of the d-(AATTGCAATT) self-complementary oligodeoxynucleotide in solution	scientific article

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scholarly article

1 reference

Europe PubMed Central

13 August 2017

Study of structure, base-pair opening kinetics and proton exchange mechanism of the d-(AATTGCAATT) self-complementary oligodeoxynucleotide in solution (English)

1 reference

Europe PubMed Central

13 August 2017

author name string

Kochoyan M

1

1 reference

Europe PubMed Central

13 August 2017

Lancelot G

2

1 reference

Europe PubMed Central

13 August 2017

Leroy JL

3

1 reference

Europe PubMed Central

13 August 2017

language of work or name

0 references

publication date

1 August 1988

1 reference

Europe PubMed Central

13 August 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

13 August 2017

16

1 reference

Europe PubMed Central

13 August 2017

15

1 reference

Europe PubMed Central

13 August 2017

7685-7702

1 reference

Europe PubMed Central

13 August 2017

Conformations of A-DNA and B-DNA in agreement with fiber X-ray and infrared dichroism

1 reference

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A one- and two-dimensional NMR study of the B to Z transition of (m5dC-dG)3 in methanolic solution

1 reference

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30 September 2017

Two-dimensional proton nuclear magnetic resonance investigation of the synthetic deoxyribonucleic acid decamer d(ATATCGATAT)2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Nuclear magnetic resonance study of d-TGGCCA in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

A 300- and 600-MHz proton nuclear magnetic resonance investigation of a 12 base pair deoxyribonucleic acid restriction fragment: relaxation behavior of the low-field resonances in water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Two-dimensional 1H NMR study of the lambda operator site OL1: a sequential assignment strategy and its application

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Duplex-hairpin transitions in DNA: NMR studies on CGCGTATACGCG.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

1H NMR study of the base-pairing reactions of d(GGAATTCC): salt and polyamine effects on the imino proton exchange

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Absorption mode two-dimensional NOE spectroscopy of exchangeable protons in oligonucleotides

1 reference

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30 September 2017

Characterization of base-pair opening in deoxynucleotide duplexes using catalyzed exchange of the imino proton

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Base pair opening dynamics of a 2-aminopurine substituted Eco RI restriction sequence and its unsubstituted counterpart in oligonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Proton exchange and base-pair lifetimes in a deoxy-duplex containing a purine-pyrimidine step and in the duplex of inverse sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Pulsed FT-NMR double resonance studies of yeast tRNAPhe: specific nuclear Overhauser effects and reinterpretation of low temperature relaxation data

1 reference

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30 September 2017

Proton nuclear magnetic resonance investigations of fraying in double-stranded d-ApTpGpCpApT in aqueous solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Base-pair opening and closing reactions in the double helix. A stopped-flow hydrogen exchange study in poly(rA).poly(rU).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Imino proton exchange in the 5S RNA of Escherichia coli and its complex with protein L25 at 490 MHz.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

30 September 2017

Synthesis and structural studies of a self-complementary decadeoxynucleotide d(AATTGCAATT) I. - Synthesis and chemical characterization of the decanucleotide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

29 June 2018

Nuclear magnetic resonance study of the proton exchange rate in the operator-promoter DNA sequence of the trp operon of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

29 June 2018

Proton exchange and base-pair kinetics of poly(rA).poly(rU) and poly(rI).poly(rC).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=338435

29 June 2018

Sequential resonance assignments in 1H NMR spectra of oligonucleotides by two-dimensional NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete assignment of the non-exchangeable proton nmr resonances of [d-(GGAATTCC)]2 using two-dimensional nuclear overhauser effect spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequential assignment of the 1H and 31P resonances of the double stranded deoxynucleotide d (ATGCAT)2 by 2D-NMR correlation spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformation and dynamics of the Pribnow box region of the self-complementary d(C-G-A-T-T-A-T-A-A-T-C-G) duplex in solution

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR studies on oligodeoxyribonucleotides containing the dam methylation site GATC. Comparison between d(GGATCC) and d(GGm6ATCC)

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A proton 2D-NMR study of an oligodeoxyribonucleotide containing N6-methyladenine:d(GGm6ATATCC)

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear magnetic resonance studies of complex formation between the oligonucleotide d(TATC) covalently linked to an acridine derivative and its complementary sequence d(GATA)

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A proton NMR spin-lattice relaxation study of the imino proton exchange kinetics in calf-thymus DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A two-dimensional 1H-NMR study of the dam methylase site: comparison between the hemimethylated GATC sequence, its unmethylated analogue and a hemimethylated CATG sequence. The sequence dependence of methylation upon base-pair lifetimes

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Internal motions of transfer RNA: a study of exchanging protons by magnetic resonance

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

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General acid-base catalysis in nucleobase amino proton exchange: cytidine

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

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The molecular mechanism of thermal unfolding of Escherichia coli formylmethionine transfer RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

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Synthesis and structural studies of a self-complementary decadeoxynucleotide d(AATTGCAATT) II. - Proton magnetic resonance studies

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A hydrogen exchange study of the open segment in a DNA double helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence-specific recognition of DNA: assignment of nonexchangeable proton resonances in the consensus Pribnow promoter DNA sequence by two-dimensional NMR

1 reference

https://pubmed.ncbi.nlm.nih.gov/2842732

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/16.15.7685

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

1 reference

Europe PubMed Central

13 August 2017

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