Reconstitution of the very short patch repair pathway from Escherichia coli (Q36294768)

13 August 2017

Reconstitution of the very short patch repair pathway from Escherichia coli (English)

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13 August 2017

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Adam B Robertson

1

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13 August 2017

Steven W Matson

series ordinal

2

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13 August 2017

language of work or name

English

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publication date

30 July 2012

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Journal of Biological Chemistry

13 August 2017

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13 August 2017

287

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13 August 2017

39

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13 August 2017

32953-32966

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describes a project that uses

13 August 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3463329/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Wot the 'L-Does MutL do?

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MutL: conducting the cell's response to mismatched and misaligned DNA.

30 September 2017

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The multifaceted mismatch-repair system

30 September 2017

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Cytosine methylation and DNA repair

30 September 2017

1 reference

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DNA mismatch repair: functions and mechanisms

30 September 2017

1 reference

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Mechanism of the Escherichia coli DNA T:G-mismatch endonuclease (Vsr protein) probed with thiophosphate-containing oligodeoxynucleotides

30 September 2017

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30 September 2017

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DNA ligases ensure fidelity by interrogating minor groove contacts

30 September 2017

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DNA mismatch repair: molecular mechanisms and biological function

30 September 2017

1 reference

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Cooperation and competition in mismatch repair: very short-patch repair and methyl-directed mismatch repair in Escherichia coli

30 September 2017

1 reference

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A second NAD(+)-dependent DNA ligase (LigB) in Escherichia coli

30 September 2017

1 reference

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Interaction of the E. coli DNA G:T-mismatch endonuclease (vsr protein) with oligonucleotides containing its target sequence

30 September 2017

1 reference

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DNA mismatch repair and genetic instability

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Principal causes of hot spots for cytosine to thymine mutations at sites of cytosine methylation in growing cells. A model, its experimental support and implications

30 September 2017

1 reference

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Crystallographic and functional studies of very short patch repair endonuclease

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

The Escherichia coli MutL protein stimulates binding of Vsr and MutS to heteroduplex DNA.

30 September 2017

1 reference

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The Vsr endonuclease of Escherichia coli: an efficient DNA repair enzyme and a potent mutagen

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Mismatch repair in replication fidelity, genetic recombination, and cancer biology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Very short patch repair: reducing the cost of cytosine methylation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

DNA-replication fidelity, mismatch repair and genome instability in cancer cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

The rate of hydrolytic deamination of 5-methylcytosine in double-stranded DNA

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Very short patch repair of T:G mismatches in vivo: importance of context and accessory proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Interaction of deoxyinosine 3'-endonuclease from Escherichia coli with DNA containing deoxyinosine

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

An N -Glycosidase from Escherichia coli That Releases Free Uracil from DNA Containing Deaminated Cytosine Residues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Mismatch-containing oligonucleotide duplexes bound by the E. coli mutS-encoded protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Cloning and characterization of the dcm locus of Escherichia coli K-12

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Bacterial genes mutL, mutS, and dcm participate in repair of mismatches at 5-methylcytosine sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Very short patch mismatch repair in phage lambda: repair sites and length of repair tracts.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

A gene required for very short patch repair in Escherichia coli is adjacent to the DNA cytosine methylase gene

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Spontaneous mutation at a 5-methylcytosine hotspot is prevented by very short patch (VSP) mismatch repair

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

N-Glycosidase activity in extracts of Bacillus subtilis and its inhibition after infection with bacteriophage PBS2.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

On the processive mechanism of Escherichia coli DNA polymerase I. Quantitative assessment of processivity

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

The Escherichia coli mismatch repair protein MutL recruits the Vsr and MutH endonucleases in response to DNA damage.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

DNA mismatch-repair in Escherichia coli counteracting the hydrolytic deamination of 5-methyl-cytosine residues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

GATC sequences, DNA nicks and the MutH function in Escherichia coli mismatch repair

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Physical and functional interactions between Escherichia coli MutL and the Vsr repair endonuclease

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Mismatch repair and recombination in E. coli.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Mispair specificity of methyl-directed DNA mismatch correction in vitro

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Isolation and characterization of the Escherichia coli mutH gene product.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Genetic requirements for hyper-recombination by very short patch mismatch repair: involvement of Escherichia coli DNA polymerase I.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Isolation and characterization of the Escherichia coli mutL gene product.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3463329

Functional interactions between the MutL and Vsr proteins of Escherichia coli are dependent on the N-terminus of Vsr.

29 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.384321

The DNA binding activity of MutL is required for methyl-directed mismatch repair in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.384321

Characterization of functional interactions among the Escherichia coli mismatch repair proteins using a bacterial two-hybrid assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.384321

Mutagenic deamination of cytosine residues in DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.384321

The vsr gene product of E. coli K-12 is a strand- and sequence-specific DNA mismatch endonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M112.384321

A new gene involved in mismatch correction in Escherichia coli

21 January 2018

1 reference

12 December 2020

MutL-catalyzed ATP hydrolysis is required at a post-UvrD loading step in methyl-directed mismatch repair

1 reference

12 December 2020

DNA binding and cleavage selectivity of the Escherichia coli DNA G:T-mismatch endonuclease (vsr protein)

1 reference

12 December 2020

Interaction of Escherichia coli MutS and MutL at a DNA mismatch

1 reference

12 December 2020

Deoxyribonucleic acid ligase. Isolation and physical characterization of the homogeneous enzyme from Escherichia coli

1 reference

12 December 2020

Heat-induced deamination of cytosine residues in deoxyribonucleic acid

1 reference

12 December 2020

Hypoxanthine in deoxyribonucleic acid: generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus

1 reference

12 December 2020

Characterization of strand displacement synthesis catalyzed by bacteriophage T7 DNA polymerase

1 reference

12 December 2020

Initiation of methyl-directed mismatch repair

1 reference

12 December 2020

Purification and characterization of a novel deoxyinosine-specific enzyme, deoxyinosine 3' endonuclease, from Escherichia coli

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M112.384321

1 reference

13 August 2017

1 reference

13 August 2017

1 reference