Bayesian statistical analysis of protein side-chain rotamer preferences (Q36280544)

13 August 2017

Bayesian statistical analysis of protein side-chain rotamer preferences (English)

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13 August 2017

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2

Cohen FE

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13 August 2017

1

Dunbrack RL Jr

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13 August 2017

1 August 1997

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13 August 2017

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13 August 2017

6

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13 August 2017

1661-1681

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13 August 2017

8

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Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool

13 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Improving the quality of NMR and crystallographic protein structures by means of a conformational database potential derived from structure databases

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Comparative protein modelling by satisfaction of spatial restraints

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

A statistical analysis of side-chain conformations in proteins: comparison with ECEPP predictions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Side-chain entropy and packing in proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Conformational analysis of the backbone-dependent rotamer preferences of protein sidechains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Principles of protein folding--a perspective from simple exact models.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Structure and refinement of penicillopepsin at 1.8 Å resolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Molecular Orbital Calculations on the Conformation of Amino Acid Residues of Proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Conformational analysis of aromatic amino acids by x-ray crystallography

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Accurate modeling of protein conformation by automatic segment matching

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Conformation of amino acid side-chains in proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

An analysis of side-chain conformation in proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

An algorithm for determining the conformation of polypeptide segments in proteins by systematic search

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

A new approach to the rapid determination of protein side chain conformations

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Side-chain torsional potentials: effect of dipeptide, protein, and solvent environment

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

Rotamers: to be or not to be? An analysis of amino acid side-chain conformations in globular proteins.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143774

OBSTRUCT: a program to obtain largest cliques from a protein sequence set according to structural resolution and sequence similarity

22 September 2018

1 reference

12 December 2020

Studies on the conformation of amino acids. IX. Conformations of butyl, seryl, threonyl, cysteinyl, and valyl residues in a dipeptide unit

1 reference

12 December 2020

Studies on the conformation of amino acids X. Conformations of norvalyl, leucyl and aromatic side groups in a dipeptide unit

1 reference

12 December 2020

Studies on the conformation of amino acids. XI. Analysis of the observed side group conformation in proteins

1 reference

12 December 2020

Analysis of the relationship between side-chain conformation and secondary structure in globular proteins

1 reference

12 December 2020

Identifiers

DOI

10.1002/PRO.5560060807

1 reference

13 August 2017

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13 August 2017

1 reference

PMCID

2143774