An epigenetic code for DNA damage repair pathways? (Q36164740)

12 August 2017

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title

An epigenetic code for DNA damage repair pathways? (English)

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12 August 2017

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Paul O Hassa

1

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PubMed ID

15959555

12 August 2017

Michael O Hottiger

series ordinal

2

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12 August 2017

1 June 2005

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Biochemistry and Cell Biology

12 August 2017

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12 August 2017

83

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12 August 2017

3

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12 August 2017

270-285

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HMGB proteins and gene expression

12 August 2017

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21 January 2018

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Ordered cooperative functions of PRMT1, p300, and CARM1 in transcriptional activation by p53

21 January 2018

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Histone variants and histone modifications: a structural perspective

21 January 2018

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Histone methylation: dynamic or static?

21 January 2018

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Increased ionizing radiation sensitivity and genomic instability in the absence of histone H2AX

21 January 2018

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Methylation at arginine 17 of histone H3 is linked to gene activation

21 January 2018

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Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopy

21 January 2018

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Visualization of G1 chromosomes: a folded, twisted, supercoiled chromonema model of interphase chromatid structure

21 January 2018

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DNA repair/pro-apoptotic dual-role proteins in five major DNA repair pathways: fail-safe protection against carcinogenesis

21 January 2018

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Acetylation of the human DNA glycosylase NEIL2 and inhibition of its activity

21 January 2018

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Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair.

21 January 2018

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Chromosomal protein HMGN1 enhances the rate of DNA repair in chromatin

21 January 2018

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The Sir2 family of protein deacetylases

21 January 2018

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A combination of different mass spectroscopic techniques for the analysis of dynamic changes of histone modifications.

21 January 2018

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The use of mass spectrometry for the analysis of histone modifications.

21 January 2018

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UV-damaged DNA-binding protein in the TFTC complex links DNA damage recognition to nucleosome acetylation

21 January 2018

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Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction

21 January 2018

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The many colours of chromodomains.

21 January 2018

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ATM phosphorylates histone H2AX in response to DNA double-strand breaks

21 January 2018

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K8 and K12 are biotinylated in human histone H4.

21 January 2018

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The diverse functions of histone acetyltransferase complexes.

21 January 2018

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HMGN dynamics and chromatin function.

21 January 2018

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Genomic instability in mice lacking histone H2AX

21 January 2018

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Ubiquitination of histone H3 in elongating spermatids of rat testes.

21 January 2018

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Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation

21 January 2018

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Esa1p is an essential histone acetyltransferase required for cell cycle progression

21 January 2018

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Structural Basis for Histone and Phosphohistone Binding by the GCN5 Histone Acetyltransferase

21 January 2018

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Who's on first in the cellular response to DNA damage?

21 January 2018

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Arginine methyltransferase CARM1 is a promoter-specific regulator of NF-kappaB-dependent gene expression

21 January 2018

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Histone deimination antagonizes arginine methylation

21 January 2018

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Histone deacetylases (HDACs): characterization of the classical HDAC family

21 January 2018

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Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites

21 January 2018

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Stimulation of deoxyribonucleic acid excision repair in human fibroblasts pretreated with sodium butyrate.

21 January 2018

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Chromatin dynamics at DNA replication, transcription and repair

21 January 2018

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Focusing on foci: H2AX and the recruitment of DNA-damage response factors

21 January 2018

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H2AX: the histone guardian of the genome

21 January 2018

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Phosphorylation of histone H2B at DNA double-strand breaks.

21 January 2018

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Histone and chromatin cross-talk

21 January 2018

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8-Oxoguanine DNA damage: at the crossroad of alternative repair pathways.

21 January 2018

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Phosphorylation of histone H2AX and activation of Mre11, Rad50, and Nbs1 in response to replication-dependent DNA double-strand breaks induced by mammalian DNA topoisomerase I cleavage complexes.

21 January 2018

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X-ray survival characteristics and genetic analysis for nine Saccharomyces deletion mutants that show altered radiation sensitivity

21 January 2018

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A chromosomal SIR2 homologue with both histone NAD-dependent ADP-ribosyltransferase and deacetylase activities is involved in DNA repair in Trypanosoma brucei

21 January 2018

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SUMO and ubiquitin in the nucleus: different functions, similar mechanisms?

21 January 2018

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ADP-ribosylation of core histones and their acetylated subspecies

21 January 2018

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Regulation of nucleotide excision repair in bacteria and mammalian cells.

21 January 2018

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Acetylation regulates the DNA end-trimming activity of DNA polymerase beta

21 January 2018

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Histone acetyl transferases: a role in DNA repair and DNA replication

21 January 2018

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Regulation of human flap endonuclease-1 activity by acetylation through the transcriptional coactivator p300

21 January 2018

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The functional role of poly(ADP-ribose)polymerase 1 as novel coactivator of NF-kappaB in inflammatory disorders

21 January 2018

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Transcriptional coactivation of nuclear factor-kappaB-dependent gene expression by p300 is regulated by poly(ADP)-ribose polymerase-1.

21 January 2018

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Chromatin assembly by DNA-translocating motors

21 January 2018

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Facile synthesis of site-specifically acetylated and methylated histone proteins: reagents for evaluation of the histone code hypothesis

21 January 2018

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Phosphorylation of human Fen1 by cyclin-dependent kinase modulates its role in replication fork regulation

21 January 2018

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Molecular mechanisms of DNA mismatch repair

21 January 2018

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Eukaryotic DNA Polymerases

21 January 2018

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Identification and phylogenetic analyses of the protein arginine methyltransferase gene family in fish and ascidians

21 January 2018

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Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks

21 January 2018

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Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis

21 January 2018

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Sensing and repairing DNA double-strand breaks

21 January 2018

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Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail

21 January 2018

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Histone ubiquitination: a tagging tail unfolds?

21 January 2018

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Saccharomyces cerevisiae Sin3p facilitates DNA double-strand break repair

21 January 2018

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Re-SET-ting heterochromatin by histone methyltransferases

21 January 2018

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Translating the Histone Code

21 January 2018

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CBP and p300: HATs for different occasions

21 January 2018

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The nucleosome: from genomic organization to genomic regulation

21 January 2018

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NAD+-dependent modulation of chromatin structure and transcription by nucleosome binding properties of PARP-1.

21 January 2018

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NBS1 localizes to gamma-H2AX foci through interaction with the FHA/BRCT domain

21 January 2018

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Histone acetylation and deacetylation in yeast

21 January 2018

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Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions

21 January 2018

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The many faces of histone lysine methylation

21 January 2018

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An epigenetic road map for histone lysine methylation

21 January 2018

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Repair of endogenous DNA damage

21 January 2018

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Quality control by DNA repair

21 January 2018

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Post-translational modification of poly(ADP-ribose) polymerase induced by DNA strand breaks

21 January 2018

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Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

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Mammalian cell cycle checkpoints: signalling pathways and their organization in space and time

21 January 2018

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Chromatin remodeling by ATP-dependent molecular machines.

21 January 2018

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Noncovalent binding of poly(ADP-ribose) to nuclear matrix proteins: developmental changes and tissue specificity.

21 January 2018

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Phylogenomics of the nucleosome

21 January 2018

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BRCT Repeats As Phosphopeptide-Binding Modules Involved in Protein Targeting

21 January 2018

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Protein modules that manipulate histone tails for chromatin regulation

21 January 2018

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Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27

21 January 2018

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Histone modifications and DNA double-strand break repair

21 January 2018

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Persistent interactions of core histone tails with nucleosomal DNA following acetylation and transcription factor binding

21 January 2018

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Reduced histone biotinylation in multiple carboxylase deficiency patients: a nuclear role for holocarboxylase synthetase

21 January 2018

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Cooperation between complexes that regulate chromatin structure and transcription

21 January 2018

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Ubiquitination of histone H2B by Rad6 is required for efficient Dot1-mediated methylation of histone H3 lysine 79.

21 January 2018

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Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9

21 January 2018

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Phosphorylation of histone H3: a balancing act between chromosome condensation and transcriptional activation

21 January 2018

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Purification of ADP-ribosylated nuclear proteins by covalent chromatography on dihydroxyboryl polyacrylamide beads and their characterization

21 January 2018

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H2B ubiquitylation: the end is in sight

21 January 2018

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Human SWI/SNF-associated PRMT5 methylates histone H3 arginine 8 and negatively regulates expression of ST7 and NM23 tumor suppressor genes

21 January 2018

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DNA-PK is activated by nucleosomes and phosphorylates H2AX within the nucleosomes in an acetylation-dependent manner

21 January 2018

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A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage

21 January 2018

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Exposure to UV light causes increased biotinylation of histones in Jurkat cells.

21 January 2018

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Chromatin remodeling enzymes: taming the machines. Third in review series on chromatin dynamics

21 January 2018

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Cellular machineries for chromosomal DNA repair.

21 January 2018

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Histones and histone modifications

21 January 2018

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Phosphorylation of serine 10 in histone H3, what for?

21 January 2018

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Histone H3 and the histone acetyltransferase Hat1p contribute to DNA double-strand break repair

21 January 2018

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Regulation of chromatin structure by site-specific histone H3 methyltransferases

21 January 2018

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Molecular biology of HMGA proteins: hubs of nuclear function

21 January 2018

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The structure of DNA in the nucleosome core

21 January 2018

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DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139

21 January 2018

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Megabase chromatin domains involved in DNA double-strand breaks in vivo

21 January 2018

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Methylation of histone H4 lysine 20 controls recruitment of Crb2 to sites of DNA damage

21 January 2018

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Chemistry and biology of DNA repair

21 January 2018

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Signaling network model of chromatin

21 January 2018

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Methylation of histone H3 by coactivator-associated arginine methyltransferase 1

21 January 2018

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Histone demethylation mediated by the nuclear amine oxidase homolog LSD1

21 January 2018

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Histone sumoylation is associated with transcriptional repression

21 January 2018

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21 January 2018

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The interacting pathways for prevention and repair of oxidative DNA damage

21 January 2018

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Biotinylation of histones in human cells. Effects of cell proliferation

21 January 2018

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ATM and DNA-PK function redundantly to phosphorylate H2AX after exposure to ionizing radiation

21 January 2018

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The language of covalent histone modifications

21 January 2018

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Methylation of histone H4 at arginine 3 occurs in vivo and is mediated by the nuclear receptor coactivator PRMT1

21 January 2018

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Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair

21 January 2018

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HMG1 and 2: architectural DNA-binding proteins

21 January 2018

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Recombinational DNA repair and human disease

21 January 2018

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Association of CBP/p300 acetylase and thymine DNA glycosylase links DNA repair and transcription

21 January 2018

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Structure and function of histone methyltransferases

21 January 2018

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Chromatin remodeling and transcription

21 January 2018

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Cellular memory and the histone code

21 January 2018

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The Cockayne syndrome B protein, involved in transcription-coupled DNA repair, resides in an RNA polymerase II-containing complex

21 January 2018

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Class II histone deacetylases: versatile regulators

21 January 2018

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Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase.

21 January 2018

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Human PAD4 regulates histone arginine methylation levels via demethylimination

21 January 2018

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Mice lacking ADPRT and poly(ADP-ribosyl)ation develop normally but are susceptible to skin disease

21 January 2018

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Histone H2AX is phosphorylated in an ATR-dependent manner in response to replicational stress

21 January 2018

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Mono ADP-ribosylation and poly ADP-ribosylation of proteins in normal and malignant tissues.

21 January 2018

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Higher-order structure of chromatin and chromosomes

21 January 2018

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A chromatin folding model that incorporates linker variability generates fibers resembling the native structures

21 January 2018

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Enzyme-bound early product of purified poly(ADP-ribose) polymerase

21 January 2018

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Evidence for involvement of HMGB1 protein in human DNA mismatch repair

21 January 2018

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CENP-A is phosphorylated by Aurora B kinase and plays an unexpected role in completion of cytokinesis

21 January 2018

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Bromodomain: an acetyl-lysine binding domain

21 January 2018

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Alkylating DNA damage stimulates a regulated form of necrotic cell death

21 January 2018

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21 January 2018

Identifiers

DOI

10.1139/O05-034

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12 August 2017

1 reference

PubMed ID

15959555