Analysis of predicted carbohydrate transport systems encoded by Bifidobacterium bifidum PRL2010 (Q36155649)

12 August 2017

Analysis of predicted carbohydrate transport systems encoded by Bifidobacterium bifidum PRL2010 (English)

1 reference

12 August 2017

Bifidobacterium bifidum

Bifidobacterium bifidum

1 reference

6

Douwe van Sinderen

1 reference

12 August 2017

Francesco Strati

2

0 references

Francesca Turroni

Francesca Turroni

1

0 references

Sabrina Duranti

Sabrina Duranti

5

0 references

Marco Ventura

Marco Ventura

7

0 references

author name string

Elena Foroni

3

1 reference

PMCID

3416360

12 August 2017

Fausta Serafini

4

1 reference

PMCID

3416360

12 August 2017

language of work or name

English

0 references

publication date

4 May 2012

1 reference

Applied and Environmental Microbiology

12 August 2017

1 reference

12 August 2017

78

1 reference

12 August 2017

14

1 reference

12 August 2017

5002-5012

1 reference

Global genome transcription profiling of Bifidobacterium bifidum PRL2010 under in vitro conditions and identification of reference genes for quantitative real-time PCR

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Ability of Bifidobacterium breve to grow on different types of milk: exploring the metabolism of milk through genome analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Proteomics analysis of Bifidobacterium longum NCC2705 growing on glucose, fructose, mannose, xylose, ribose, and galactose

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Carbohydrate metabolism in Bifidobacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genomics and ecological overview of the genus Bifidobacterium

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Complete genome sequence of Bifidobacterium bifidum S17

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genomic insights into bifidobacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Exploring the diversity of the bifidobacterial population in the human intestinal tract

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genome-scale analyses of health-promoting bacteria: probiogenomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

The Transporter Classification Database: recent advances

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Structure, function, and evolution of bacterial ATP-binding cassette systems

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Bifidobacterium carbohydrases-their role in breakdown and synthesis of (potential) prebiotics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Sugar transport systems of Bifidobacterium longum NCC2705.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Topological predictions for integral membrane permeases of the phosphoenolpyruvate:sugar phosphotransferase system

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Identification and characterization of a fructose phosphotransferase system in Bifidobacterium breve UCC2003

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

TCDB: the Transporter Classification Database for membrane transport protein analyses and information

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

In silico and transcriptional analysis of carbohydrate uptake systems of Streptomyces coelicolor A3(2)

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Induction of sucrose utilization genes from Bifidobacterium lactis by sucrose and raffinose

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Artemis: sequence visualization and annotation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Genetic strategies for mucin metabolism in Bifidobacterium bifidum PRL2010: an example of possible human-microbe co-evolution

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Examination of faecal Bifidobacterium populations in breast- and formula-fed infants during the first 18 months of life.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Growth of infant faecal bifidobacteria and clostridia on prebiotic oligosaccharides in in vitro conditions.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

An alternating least squares approach to inferring phylogenies from pairwise distances.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3416360

Diversity of transport mechanisms: common structural principles

23 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22562993

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Inventory, assembly and analysis of Bacillus subtilis ABC transport systems

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22562993

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.00629-12

1 reference

12 August 2017

1 reference

12 August 2017

1 reference

PMCID

3416360