Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations (Q36110990)

12 August 2017

Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations (English)

1 reference

12 August 2017

Spyros Oikonomopoulos

1

1 reference

12 August 2017

Yu Chang Wang

2

1 reference

12 August 2017

Haig Djambazian

3

1 reference

12 August 2017

Dunarel Badescu

4

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12 August 2017

Jiannis Ragoussis

5

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12 August 2017

language of work or name

English

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publication date

24 August 2016

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12 August 2017

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12 August 2017

6

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12 August 2017

31602

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Creative Commons Attribution 4.0 International

12 August 2017

start time

24 August 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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exact match

https://scigraph.springernature.com/pub.10.1038/srep31602

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cites work

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MinION Analysis and Reference Consortium: Phase 1 data release and analysis

2 October 2017

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Species-level resolution of 16S rRNA gene amplicons sequenced through the MinION™ portable nanopore sequencer.

2 October 2017

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Determining exon connectivity in complex mRNAs by nanopore sequencing

2 October 2017

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

2 October 2017

1 reference

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A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer.

2 October 2017

1 reference

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Computational approaches for isoform detection and estimation: good and bad news.

2 October 2017

1 reference

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RNA sequencing: from tag-based profiling to resolving complete transcript structure

2 October 2017

1 reference

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Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms

2 October 2017

1 reference

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Full-length RNA-seq from single cells using Smart-seq2.

2 October 2017

1 reference

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From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing.

2 October 2017

1 reference

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Characterization of the human ESC transcriptome by hybrid sequencing

2 October 2017

1 reference

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An evaluation of the PacBio RS platform for sequencing and de novo assembly of a chloroplast genome

2 October 2017

1 reference

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Characterizing and measuring bias in sequence data

2 October 2017

1 reference

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Extensive transcriptional heterogeneity revealed by isoform profiling

2 October 2017

1 reference

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A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

2 October 2017

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Length and GC-biases during sequencing library amplification: a comparison of various polymerase-buffer systems with ancient and modern DNA sequencing libraries

2 October 2017

1 reference

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An integrated semiconductor device enabling non-optical genome sequencing

2 October 2017

1 reference

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Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

2 October 2017

1 reference

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

2 October 2017

1 reference

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Real-time DNA sequencing from single polymerase molecules

2 October 2017

1 reference

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Accurate whole human genome sequencing using reversible terminator chemistry

2 October 2017

1 reference

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Simple cDNA normalization using kamchatka crab duplex-specific nuclease

2 October 2017

1 reference

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Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4995519

Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4995519

23 September 2018

Identifiers

DOI

10.1038/SREP31602

1 reference

release_tiqc5xw5srentd3hrapvpl5fcy

12 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/tiqc5xw5srentd3hrapvpl5fcy

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

12 August 2017

1 reference