H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization (Q36106924)

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27 January 2020

title

H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization (English)

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27 January 2020

7

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27 January 2020

Lothar Schermelleh

14

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27 January 2020

author name string

Clemens Bönisch

1

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27 January 2020

Katrin Schneider

2

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27 January 2020

Sebastian Pünzeler

3

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27 January 2020

Sonja M Wiedemann

4

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27 January 2020

Christina Bielmeier

5

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27 January 2020

Marco Bocola

6

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27 January 2020

Wolfgang Kuegel

8

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27 January 2020

Jürgen Neumann

9

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27 January 2020

Elisabeth Kremmer

10

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27 January 2020

Heinrich Leonhardt

11

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27 January 2020

Matthias Mann

12

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27 January 2020

Jens Michaelis

13

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27 January 2020

Sandra B Hake

15

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27 January 2020

language of work or name

English

0 references

publication date

29 March 2012

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27 January 2020

published in

Nucleic Acids Research

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27 January 2020

volume

40

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27 January 2020

issue

13

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27 January 2020

page(s)

5951-5964

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Creative Commons Attribution-NonCommercial 3.0 Unported

27 January 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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2 October 2017

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Identification and characterization of two novel primate-specific histone H3 variants, H3.X and H3.Y.

2 October 2017

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Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis

2 October 2017

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2 October 2017

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Reconciling the positive and negative roles of histone H2A.Z in gene transcription

2 October 2017

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Dissecting the binding mechanism of the linker histone in live cells: an integrated FRAP analysis.

2 October 2017

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H2A.Z overexpression promotes cellular proliferation of breast cancer cells

2 October 2017

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H2A.Bbd: an X-chromosome-encoded histone involved in mammalian spermiogenesis

2 October 2017

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Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates

2 October 2017

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NuA4 and SWR1-C: two chromatin-modifying complexes with overlapping functions and components

2 October 2017

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The euchromatic and heterochromatic landscapes are shaped by antagonizing effects of transcription on H2A.Z deposition

2 October 2017

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Nucleosome disassembly intermediates characterized by single-molecule FRET.

2 October 2017

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Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs

2 October 2017

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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

2 October 2017

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Global discovery of primate-specific genes in the human genome

2 October 2017

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Regulation of gene expression and cellular proliferation by histone H2A.Z.

2 October 2017

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Transcriptional and epigenetic functions of histone variant H2A.Z.

2 October 2017

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The evolutionary differentiation of two histone H2A.Z variants in chordates (H2A.Z-1 and H2A.Z-2) is mediated by a stepwise mutation process that affects three amino acid residues

2 October 2017

1 reference

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

2 October 2017

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Genomic analysis of estrogen cascade reveals histone variant H2A.Z associated with breast cancer progression

2 October 2017

1 reference

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Chromatin proteomics and epigenetic regulatory circuits.

2 October 2017

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H2A.Z: view from the top.

2 October 2017

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A chemical method for fast and sensitive detection of DNA synthesis in vivo

2 October 2017

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Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants

2 October 2017

1 reference

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Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4

2 October 2017

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Monoubiquitylation of H2A.Z distinguishes its association with euchromatin or facultative heterochromatin

2 October 2017

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Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

2 October 2017

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Histone variant nucleosomes: structure, function and implication in disease

2 October 2017

1 reference

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H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state

2 October 2017

1 reference

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Shot-noise limited single-molecule FRET histograms: comparison between theory and experiments

2 October 2017

1 reference

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The nucleosome: a little variation goes a long way.

2 October 2017

1 reference

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Purification of a human SRCAP complex that remodels chromatin by incorporating the histone variant H2A.Z into nucleosomes

2 October 2017

1 reference

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Quantitative proteomic analysis of post-translational modifications of human histones

2 October 2017

1 reference

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Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Swc2 is a widely conserved H2AZ-binding module essential for ATP-dependent histone exchange

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Splicing regulates NAD metabolite binding to histone macroH2A.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

H1 family histones in the nucleus. Control of binding and localization by the C-terminal domain

2 October 2017

1 reference

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Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Accurate FRET measurements within single diffusing biomolecules using alternating-laser excitation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Making optimal use of empirical energy functions: force-field parameterization in crystal space

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

SWI/SNF remodeling and p300-dependent transcription of histone variant H2ABbd nucleosomal arrays.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Histone variant H2ABbd confers lower stability to the nucleosome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Development and testing of a general amber force field

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

High- and low-mobility populations of HP1 in heterochromatin of mammalian cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Reconstitution of nucleosome core particles from recombinant histones and DNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Pericentric heterochromatin becomes enriched with H2A.Z during early mammalian development

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Maintenance of stable heterochromatin domains by dynamic HP1 binding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Fast, efficient generation of high-quality atomic charges. AM1-BCC model: II. Parameterization and validation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

The many tales of a tail: carboxyl-terminal tail heterogeneity specializes histone H2A variants for defined chromatin function

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Histone H2A variants H2AX and H2AZ

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Loss of HCF-1-chromatin association precedes temperature-induced growth arrest of tsBN67 cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

A novel chromatin protein, distantly related to histone H2A, is largely excluded from the inactive X chromosome

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Dynamic binding of histone H1 to chromatin in living cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Rapid exchange of histone H1.1 on chromatin in living human cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Crystal structure of a nucleosome core particle containing the variant histone H2A.Z

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Messenger RNAs encoding mouse histone macroH2A1 isoforms are expressed at similar levels in male and female cells and result from alternative splicing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Pulsed interleaved excitation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Histone H2A mobility is regulated by its tails and acetylation of core histone tails.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Fast empirical pKa prediction by Ewald summation.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Structural dynamics of nucleosome core particle: comparison with nucleosomes containing histone variants.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

RNA interference demonstrates a novel role for H2A.Z in chromosome segregation

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Regions of variant histone His2AvD required for Drosophila development.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3401452

Extraction, purification and analysis of histones

23 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22467210

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Histone H2A.Z prepares the prostate specific antigen (PSA) gene for androgen receptor-mediated transcription and is upregulated in a model of prostate cancer progression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22467210

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Patterns of histone variant synthesis can distinguish G0 from G1 cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22467210

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKS267

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22467210%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22467210%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22467210%20AND%20SRC:MED&resulttype=core&format=json