Hidden Markov Models, grammars, and biology: a tutorial (Q36106478)

12 August 2017

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title

Hidden Markov Models, grammars, and biology: a tutorial (English)

1 reference

12 August 2017

Shibaji Mukherjee

1

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12 August 2017

Sushmita Mitra

series ordinal

2

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12 August 2017

language of work or name

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1 April 2005

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Journal of Bioinformatics and Computational Biology

12 August 2017

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12 August 2017

3

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12 August 2017

2

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12 August 2017

491-526

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Combining evidence using p-values: application to sequence homology searches

12 August 2017

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Hidden Markov models of biological primary sequence information

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Statistical Inference for Probabilistic Functions of Finite State Markov Chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

A Maximization Technique Occurring in the Statistical Analysis of Probabilistic Functions of Markov Chains

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Greedy mixture learning for multiple motif discovery in biological sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Prediction of complete gene structures in human genomic DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Expectation maximization algorithm for identifying protein-binding sites with variable lengths from unaligned DNA fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Three models for the description of language

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

On certain formal properties of grammars

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Stochastic models for heterogeneous DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Gene structure prediction by linguistic methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Profile hidden Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

RNA sequence analysis using covariance models

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

21 January 2018

The viterbi algorithm

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Specialized hidden markov model databases for microbial genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Profile analysis: detection of distantly related proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

RNA secondary structure prediction using stochastic context-free grammars and evolutionary history

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Hidden Markov models in computational biology. Applications to protein modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

A hidden Markov model that finds genes in E. coli DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Construction of multilocus genetic linkage maps in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

The estimation of stochastic context-free grammars using the Inside-Outside algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

GeneMark.hmm: new solutions for gene finding

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Segmentation of yeast DNA using hidden Markov models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

A tutorial on hidden Markov models and selected applications in speech recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

The emergence of pattern discovery techniques in computational biology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

A dynamic programming algorithm for RNA structure prediction including pseudoknots

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Stochastic context-free grammars for tRNA modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Pfam: multiple sequence alignments and HMM-profiles of protein domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Pfam: a comprehensive database of protein domain families based on seed alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Computer prediction of RNA structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

Using Evolutionary Trees in Protein Secondary Structure Prediction and Other Comparative Sequence Analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720005001077

10.1142/S0219720005001077

21 January 2018

Identifiers

DOI

1 reference

journals/jbcb/MukherjeeM05

12 August 2017

1 reference

DBLP Dataset 2021-01-02

release_elwanfaze5gejgvylj3p32zmmm

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/elwanfaze5gejgvylj3p32zmmm

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference