Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast. (Q36102455)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17889663%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

title

Sir2 deacetylates histone H3 lysine 56 to regulate telomeric heterochromatin structure in yeast (English)

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8 January 2020

1

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5

Michael Grunstein

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8 January 2020

author name string

Qiongyi Zhang

series ordinal

2

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8 January 2020

Kangling Zhang

series ordinal

3

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8 January 2020

Wei Xie

series ordinal

4

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8 January 2020

publication date

1 September 2007

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8 January 2020

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8 January 2020

volume

27

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8 January 2020

page(s)

890-900

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8 January 2020

issue

6

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Organismal differences in post-translational modifications in histones H3 and H4.

8 January 2020

cites work

1 reference

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Bypassing the catalytic activity of SIR2 for SIR protein spreading in Saccharomyces cerevisiae.

2 October 2017

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The LRS and SIN domains: two structurally equivalent but functionally distinct nucleosomal surfaces required for transcriptional silencing

2 October 2017

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The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation.

2 October 2017

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SirT2 is a histone deacetylase with preference for histone H4 Lys 16 during mitosis

2 October 2017

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Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis

2 October 2017

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Cell cycle requirements in assembling silent chromatin in Saccharomyces cerevisiae.

2 October 2017

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A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

2 October 2017

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Acetylation in histone H3 globular domain regulates gene expression in yeast.

2 October 2017

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Histone H4 lysine 91 acetylation a core domain modification associated with chromatin assembly

2 October 2017

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The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae

2 October 2017

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Dot1p modulates silencing in yeast by methylation of the nucleosome core

2 October 2017

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Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeast

2 October 2017

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Assays for gene silencing in yeast

2 October 2017

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Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation

2 October 2017

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Domains of gene silencing near the left end of chromosome III in Saccharomyces cerevisiae

2 October 2017

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Common themes in mechanisms of gene silencing

2 October 2017

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Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

2 October 2017

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RNA polymerase III and RNA polymerase II promoter complexes are heterochromatin barriers in Saccharomyces cerevisiae

2 October 2017

1 reference

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Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase

2 October 2017

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Net1, a Sir2-associated nucleolar protein required for rDNA silencing and nucleolar integrity

2 October 2017

1 reference

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Crystal structure of the nucleosome core particle at 2.8 A resolution

2 October 2017

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Localization of Sir2p: the nucleolus as a compartment for silent information regulators

2 October 2017

1 reference

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Silent information regulator protein complexes in Saccharomyces cerevisiae: a SIR2/SIR4 complex and evidence for a regulatory domain in SIR4 that inhibits its interaction with SIR3.

2 October 2017

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An unusual form of transcriptional silencing in yeast ribosomal DNA

2 October 2017

1 reference

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SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast

2 October 2017

1 reference

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Spreading of transcriptional repressor SIR3 from telomeric heterochromatin

2 October 2017

1 reference

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Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4.

2 October 2017

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Transcriptional silencing in yeast is associated with reduced nucleosome acetylation

2 October 2017

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Position effect variegation at fission yeast centromeres.

2 October 2017

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2 October 2017

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Telomere-associated chromosome breakage in fission yeast results in variegated expression of adjacent genes

2 October 2017

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Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1.

2 October 2017

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Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: a molecular model for the formation of heterochromatin in yeast

2 October 2017

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2 October 2017

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Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae.

2 October 2017

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Telomere-proximal DNA in Saccharomyces cerevisiae is refractory to methyltransferase activity in vivo

2 October 2017

1 reference

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Histone H3 amino terminus is required for telomeric and silent mating locus repression in yeast

2 October 2017

1 reference

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Cell cycle and checkpoint regulation of histone H3 K56 acetylation by Hst3 and Hst4.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Assembly of the SIR complex and its regulation by O-acetyl-ADP-ribose, a product of NAD-dependent histone deacetylation

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Mechanism of transcriptional silencing in yeast

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Methylation of H3 lysine 4 at euchromatin promotes Sir3p association with heterochromatin

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Nucleosomes unfold completely at a transcriptionally active promoter.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Chromosomal gradient of histone acetylation established by Sas2p and Sir2p functions as a shield against gene silencing

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Sir2p and Sas2p opposingly regulate acetylation of yeast histone H4 lysine16 and spreading of heterochromatin

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Highly specific antibodies determine histone acetylation site usage in yeast heterochromatin and euchromatin

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

Silencers and domains of generalized repression

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2048486

A Rad53 kinase-dependent surveillance mechanism that regulates histone protein levels in S. cerevisiae

23 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17889663

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Active genes in budding yeast display enhanced in vivo accessibility to foreign DNA methylases: a novel in vivo probe for chromatin structure of yeast

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17889663

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MOLCEL.2007.07.021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17889663%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17889663%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

1 reference