Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways. (Q36091183)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26305498%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways (English)

1 reference

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22 February 2020

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5

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22 February 2020

4

Timothy M Lohman

1 reference

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22 February 2020

author name string

Sukrit Suksombat

series ordinal

1

1 reference

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22 February 2020

Rustem Khafizov

series ordinal

2

1 reference

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22 February 2020

Alexander G Kozlov

series ordinal

3

1 reference

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22 February 2020

language of work or name

English

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publication date

25 August 2015

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22 February 2020

1 reference

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22 February 2020

volume

4

1 reference

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Dynamics of equilibrium folding and unfolding transitions of titin immunoglobulin domain under constant forces.

22 February 2020

cites work

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2 October 2017

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2 October 2017

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2 October 2017

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Direct imaging of RecA nucleation and growth on single molecules of SSB-coated ssDNA

2 October 2017

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2 October 2017

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SSB functions as a sliding platform that migrates on DNA via reptation.

2 October 2017

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2 October 2017

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SSB protein diffusion on single-stranded DNA stimulates RecA filament formation.

2 October 2017

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2 October 2017

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Laminar flow cells for single-molecule studies of DNA-protein interactions

2 October 2017

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Measurement of the salt-dependent stabilization of partially open DNA by Escherichia coli SSB protein

2 October 2017

1 reference

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Direct measurements of the stabilization of single-stranded DNA under tension by single-stranded binding proteins

2 October 2017

1 reference

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Direct observation of individual RecA filaments assembling on single DNA molecules

2 October 2017

1 reference

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Real-time observation of RecA filament dynamics with single monomer resolution.

2 October 2017

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2 October 2017

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Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins

2 October 2017

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Single chromatin fiber stretching reveals physically distinct populations of disassembly events

2 October 2017

1 reference

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Mechanical processes in biochemistry

2 October 2017

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Structure of the DNA binding domain of E. coli SSB bound to ssDNA

2 October 2017

1 reference

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Polymerization and mechanical properties of single RecA-DNA filaments

2 October 2017

1 reference

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Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution

2 October 2017

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Ionic effects on the elasticity of single DNA molecules

2 October 2017

1 reference

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Entropic elasticity of lambda-phage DNA

2 October 2017

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Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities

2 October 2017

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Escherichia coli single-strand deoxyribonucleic acid binding protein: stability, specificity, and kinetics of complexes with oligonucleotides and deoxyribonucleic acid

2 October 2017

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Escherichia coli single-strand binding protein organizes single-stranded DNA in nucleosome-like units

2 October 2017

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Escherichia coli single-stranded DNA binding protein is mobile on DNA: 1H NMR study of its interaction with oligo- and polynucleotides

2 October 2017

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2 October 2017

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A DNA-Unwinding Protein Isolated from Escherichia coli: Its Interaction with DNA and with DNA Polymerases

2 October 2017

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Role of tryptophan 54 in the binding of E. coli single-stranded DNA-binding protein to single-stranded polynucleotides

2 October 2017

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Tryptophan 54 and phenylalanine 60 are involved synergistically in the binding of E. coli SSB protein to single-stranded polynucleotides

2 October 2017

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2 October 2017

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Negative co-operativity in Escherichia coli single strand binding protein-oligonucleotide interactions. II. Salt, temperature and oligonucleotide length effects

2 October 2017

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Negative co-operativity in Escherichia coli single strand binding protein-oligonucleotide interactions. I. Evidence and a quantitative model

2 October 2017

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The single-stranded DNA-binding protein of Escherichia coli

2 October 2017

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Monomers of the Escherichia coli SSB-1 mutant protein bind single-stranded DNA.

2 October 2017

1 reference

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Monomer-tetramer equilibrium of the Escherichia coli ssb-1 mutant single strand binding protein

2 October 2017

1 reference

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Two binding modes in Escherichia coli single strand binding protein-single stranded DNA complexes. Modulation by NaCl concentration.

2 October 2017

1 reference

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Salt-dependent changes in the DNA binding co-operativity of Escherichia coli single strand binding protein.

11 July 2018

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Large-scale overproduction and rapid purification of the Escherichia coli ssb gene product. Expression of the ssb gene under lambda PL control.

11 July 2018

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Cooperative binding of polyamines induces the Escherichia coli single-strand binding protein-DNA binding mode transitions

11 July 2018

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Nonlinear low-force elasticity of single-stranded DNA molecules.

11 July 2018

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Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein.

23 September 2018

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Salt dependent binding of T4 gene 32 protein to single and double-stranded DNA: single molecule force spectroscopy measurements

23 September 2018

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Zwischenmolekulare Energiewanderung und Fluoreszenz

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554%2FELIFE.08193

Folding at the speed limit

21 January 2018

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Crossref

https://api.crossref.org/works/10.7554%2FELIFE.08193

Single molecule force spectroscopy of salt-dependent bacteriophage T7 gene 2.5 protein binding to single-stranded DNA

21 January 2018

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12 December 2020

Nonblinking and long-lasting single-molecule fluorescence imaging

1 reference

12 December 2020

Escherichia coli single-strand binding protein forms multiple, distinct complexes with single-stranded DNA

1 reference

12 December 2020

A mutation in E. coli SSB protein (W54S) alters intra-tetramer negative cooperativity and inter-tetramer positive cooperativity for single-stranded DNA binding

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12 December 2020

Cooperative binding of the Escherichia coli DNA unwinding protein to single-stranded DNA

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12 December 2020

Visualization of SSB-ssDNA complexes active in the assembly of stable RecA-DNA filaments

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12 December 2020

Binding mode transitions of Escherichia coli single strand binding protein-single-stranded DNA complexes. Cation, anion, pH, and binding density effects

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12 December 2020

SSB as an organizer/mobilizer of genome maintenance complexes

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12 December 2020

Identifiers

DOI

10.7554/ELIFE.08193

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26305498%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26305498%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference