Whole-genome sequencing provides new insights into the clonal architecture of Barrett's esophagus and esophageal adenocarcinoma (Q36015250)

11 August 2017

Whole-genome sequencing provides new insights into the clonal architecture of Barrett's esophagus and esophageal adenocarcinoma (English)

1 reference

11 August 2017

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whole genome sequencing

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Andy G Lynch

12

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author name string

Caryn S Ross-Innes

1

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11 August 2017

Jennifer Becq

2

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11 August 2017

Andrew Warren

3

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11 August 2017

R Keira Cheetham

4

1 reference

11 August 2017

Helen Northen

5

1 reference

11 August 2017

Maria O'Donovan

6

1 reference

11 August 2017

Shalini Malhotra

7

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11 August 2017

Massimiliano di Pietro

8

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11 August 2017

Sergii Ivakhno

9

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11 August 2017

Miao He

10

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11 August 2017

Jamie M J Weaver

11

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11 August 2017

Zoya Kingsbury

13

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11 August 2017

Mark Ross

14

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11 August 2017

Sean Humphray

15

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11 August 2017

David Bentley

16

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11 August 2017

Rebecca C Fitzgerald

17

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11 August 2017

language of work or name

English

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publication date

20 July 2015

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11 August 2017

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11 August 2017

47

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11 August 2017

9

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11 August 2017

1038-1046

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https://scigraph.springernature.com/pub.10.1038/ng.3357

11 August 2017

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cites work

Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis.

1 reference

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Addressing overdiagnosis and overtreatment in cancer: a prescription for change

2 October 2017

1 reference

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The genomic landscape of oesophagogastric junctional adenocarcinoma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Temporal and spatial evolution of somatic chromosomal alterations: a case-cohort study of Barrett's esophagus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Signatures of mutational processes in human cancer

2 October 2017

1 reference

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Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Impact of endoscopic surveillance on mortality from Barrett's esophagus-associated esophageal adenocarcinomas

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Efficacy and durability of radiofrequency ablation for Barrett's Esophagus: systematic review and meta-analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Comparative genomic analysis of esophageal adenocarcinoma and squamous cell carcinoma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Gastrointestinal adenocarcinomas of the esophagus, stomach, and colon exhibit distinct patterns of genome instability and oncogenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Whole-genome analysis informs breast cancer response to aromatase inhibition

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Mutational processes molding the genomes of 21 breast cancers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

The life history of 21 breast cancers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Strelka: accurate somatic small-variant calling from sequenced tumor-normal sample pairs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Correcting for cancer genome size and tumour cell content enables better estimation of copy number alterations from next-generation sequence data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

The incidence of oesophageal adenocarcinoma in non-dysplastic Barrett's oesophagus: a meta-analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Initial genome sequencing and analysis of multiple myeloma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Individual crypt genetic heterogeneity and the origin of metaplastic glandular epithelium in human Barrett's oesophagus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Multistage carcinogenesis in Barrett's esophagus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Inactivation of p16, RUNX3, and HPP1 occurs early in Barrett's-associated neoplastic progression and predicts progression risk

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Selectively advantageous mutations and hitchhikers in neoplasms: p16 lesions are selected in Barrett's esophagus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Predictors of progression in Barrett's esophagus II: baseline 17p (p53) loss of heterozygosity identifies a patient subset at increased risk for neoplastic progression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

TP53 mutations in malignant and premalignant Barrett's esophagus.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Mutations of p53 in Barrett's esophagus and Barrett's cancer: a prospective study of ninety-eight cases.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4556068

Aberrant p53 protein expression is associated with an increased risk of neoplastic progression in patients with Barrett's oesophagus

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNG.3357

Dissecting out the genetic origins of Barrett's oesophagus

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26192915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Garlic, silver bullets, and surveillance upper endoscopy for Barrett's esophagus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26192915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.3357

1 reference

release_63245iynp5h7hna37shxlygzsy

11 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/63245iynp5h7hna37shxlygzsy

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

11 August 2017

1 reference