The histone deacetylase Hos2 forms an Hsp42-dependent cytoplasmic granule in quiescent yeast cells (Q35861844)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22337769%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

title

The histone deacetylase Hos2 forms an Hsp42-dependent cytoplasmic granule in quiescent yeast cells (English)

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23 January 2020

4

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23 January 2020

author name string

I-Chun Liu

series ordinal

1

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23 January 2020

Sheng-Wen Chiu

series ordinal

2

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23 January 2020

Hsin-Yi Lee

series ordinal

3

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23 January 2020

publication date

15 February 2012

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Molecular Biology of the Cell

23 January 2020

published in

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23 January 2020

volume

23

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23 January 2020

issue

7

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23 January 2020

page(s)

1231-1242

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describes a project that uses

23 January 2020

ImageJ

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3315813/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Metabolic status rather than cell cycle signals control quiescence entry and exit

1 reference

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Cytoplasmic mRNP granules at a glance

27 July 2018

1 reference

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Regulation of intermediary metabolism by protein acetylation

27 July 2018

1 reference

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Lessons on longevity from budding yeast

27 July 2018

1 reference

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Ten years of NAD-dependent SIR2 family deacetylases: implications for metabolic diseases

27 July 2018

1 reference

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Quaternary dynamics and plasticity underlie small heat shock protein chaperone function

27 July 2018

1 reference

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Nature's molecular sponges: small heat shock proteins grow into their chaperone roles

27 July 2018

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The genetic landscape of a cell

27 July 2018

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Eukaryotic stress granules: the ins and outs of translation

27 July 2018

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Biochemical pathways that regulate acetyltransferase and deacetylase activity in mammalian cells

27 July 2018

1 reference

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Differential localization to cytoplasm, nucleus or P-bodies of yeast PKA subunits under different growth conditions

27 July 2018

1 reference

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An atlas of chaperone-protein interactions in Saccharomyces cerevisiae: implications to protein folding pathways in the cell

27 July 2018

1 reference

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Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation.

27 July 2018

1 reference

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Dynamics and diversity in autophagy mechanisms: lessons from yeast

27 July 2018

1 reference

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Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae.

27 July 2018

1 reference

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RNA granules: post-transcriptional and epigenetic modulators of gene expression

27 July 2018

1 reference

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Regulation of autophagy in yeast Saccharomyces cerevisiae

27 July 2018

1 reference

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A molecular mechanism of chronological aging in yeast.

27 July 2018

1 reference

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P bodies promote stress granule assembly in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Construction, verification and experimental use of two epitope-tagged collections of budding yeast strains

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Reversible cytoplasmic localization of the proteasome in quiescent yeast cells.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Hos2p/Set3p deacetylase complex signals secretory stress through the Mpk1p cell integrity pathway

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Stress granules: the Tao of RNA triage

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

A guided tour into subcellular colocalization analysis in light microscopy

27 July 2018

1 reference

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Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Mammalian sirtuins--emerging roles in physiology, aging, and calorie restriction

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Actin bodies in yeast quiescent cells: an immediately available actin reserve?

27 July 2018

1 reference

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Protein aggregation in crowded environments.

27 July 2018

1 reference

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Molecular chaperones: assisting assembly in addition to folding

27 July 2018

1 reference

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Proteome survey reveals modularity of the yeast cell machinery

27 July 2018

1 reference

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Extension of chronological life span in yeast by decreased TOR pathway signaling

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Some like it hot: the structure and function of small heat-shock proteins.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Small heat shock proteins: molecular structure and chaperone function

27 July 2018

1 reference

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HST2 mediates SIR2-independent life-span extension by calorie restriction

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

The stationary phase model of aging in yeast for the study of oxidative stress and age-related neurodegeneration.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Processing bodies require RNA for assembly and contain nontranslating mRNAs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Subcellular distribution of enzyme I of the Escherichia coli phosphoenolpyruvate:glycose phosphotransferase system depends on growth conditions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Genomic analysis of stationary-phase and exit in Saccharomyces cerevisiae: gene expression and identification of novel essential genes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Stress granule assembly is mediated by prion-like aggregation of TIA-1

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

"Sleeping beauty": quiescence in Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Chronological aging leads to apoptosis in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Hsp42 is the general small heat shock protein in the cytosol of Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Global analysis of protein localization in budding yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Tup1-Ssn6 interacts with multiple class I histone deacetylases in vivo.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Longevity regulation in Saccharomyces cerevisiae: linking metabolism, genome stability, and heterochromatin

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Molecular chaperones as modulators of polyglutamine protein aggregation and toxicity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media

27 July 2018

1 reference

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Genomic expression programs in the response of yeast cells to environmental changes

27 July 2018

1 reference

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Rapid and reliable protein extraction from yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Modulation of life-span by histone deacetylase genes in Saccharomyces cerevisiae.

27 July 2018

1 reference

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Localization of the 26S proteasome during mitosis and meiosis in fission yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Exploring the metabolic and genetic control of gene expression on a genomic scale

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Stationary phase in the yeast Saccharomyces cerevisiae

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeast

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

RNA granules: the good, the bad and the ugly

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Genome-wide screen in Saccharomyces cerevisiae identifies vacuolar protein sorting, autophagy, biosynthetic, and tRNA methylation genes involved in life span regulation

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Metacaspase Yca1 is required for clearance of insoluble protein aggregates.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Comparative analyses of time-course gene expression profiles of the long-lived sch9Delta mutant

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

The Hsp90 inhibitor geldanamycin abrogates colocalization of eIF4E and eIF4E-transporter into stress granules and association of eIF4E with eIF4G.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

HSP90: the Rosetta stone for cellular protein dynamics?

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Reversible compartmentalization of de novo purine biosynthetic complexes in living cells

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

The deacetylase HDAC6 is a novel critical component of stress granules involved in the stress response

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Requirement of Hos2 histone deacetylase for gene activity in yeast

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Chronological lifespan of stationary phase yeast cells; a model for investigating the factors that might influence the ageing of postmitotic tissues in higher organisms

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Chaperone hsp27 inhibits translation during heat shock by binding eIF4G and facilitating dissociation of cap-initiation complexes

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

Sir2 links chromatin silencing, metabolism, and aging

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315813

24 September 2018

Identifiers

DOI

10.1091/MBC.E11-09-0752

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22337769%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22337769%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

1 reference