Structural, energetic and dynamic properties of guanine(C8)-thymine(N3) cross-links in DNA provide insights on susceptibility to nucleotide excision repair (Q35860560)

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scientific article published in December 2011

Language	Label	Description	Also known as
English	Structural, energetic and dynamic properties of guanine(C8)-thymine(N3) cross-links in DNA provide insights on susceptibility to nucleotide excision repair	scientific article published in December 2011

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

Structural, energetic and dynamic properties of guanine(C8)-thymine(N3) cross-links in DNA provide insights on susceptibility to nucleotide excision repair (English)

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

Vladimir Shafirovich

7

object named as

Vladimir Shafirovich

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

8

object named as

Suse Broyde

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Europe PubMed Central

PMC publication ID

10 August 2017

author name string

Shuang Ding

1

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Europe PubMed Central

PMC publication ID

10 August 2017

Konstantin Kropachev

2

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Europe PubMed Central

PMC publication ID

10 August 2017

Yuqin Cai

3

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Europe PubMed Central

PMC publication ID

10 August 2017

Marina Kolbanovskiy

4

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

Svetlana A Durandina

5

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

Zhi Liu

6

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Europe PubMed Central

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10 August 2017

Nicholas E Geacintov

9

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Europe PubMed Central

PMC publication ID

10 August 2017

language of work or name

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publication date

1 December 2011

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10 August 2017

Nucleic Acids Research

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Europe PubMed Central

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10 August 2017

40

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Europe PubMed Central

PMC publication ID

10 August 2017

6

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

2506-2517

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Europe PubMed Central

PMC publication ID

10 August 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Generation of guanine-thymidine cross-links in DNA by peroxynitrite/carbon dioxide

1 reference

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Genetic requirement for mutagenesis of the G[8,5-Me]T cross-link in Escherichia coli: DNA polymerases IV and V compete for error-prone bypass.

1 reference

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Base Sequence Context Effects on Nucleotide Excision Repair

1 reference

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The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions

1 reference

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Oxidation of single-stranded oligonucleotides by carbonate radical anions: generating intrastrand cross-links between guanine and thymine bases separated by cytosines

1 reference

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Quantification of oxidative single-base and intrastrand cross-link lesions in unmethylated and CpG-methylated DNA induced by Fenton-type reagents

1 reference

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The human DNA repair factor XPC-HR23B distinguishes stereoisomeric benzo[a]pyrenyl-DNA lesions

1 reference

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Identification and quantification of a guanine-thymine intrastrand cross-link lesion induced by Cu(II)/H2O2/ascorbate

1 reference

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Recognition and incision of gamma-radiation-induced cross-linked guanine-thymine tandem lesion G[8,5-Me]T by UvrABC nuclease

1 reference

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11 July 2018

DNA lesions derived from the site selective oxidation of Guanine by carbonate radical anions

1 reference

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3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

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11 July 2018

Free radical-induced double lesions in DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3315297

11 July 2018

The carbonate radical is a site-selective oxidizing agent of guanine in double-stranded oligonucleotides

1 reference

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Inflammation and cancer: back to Virchow?

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Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models

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Role of hydrophobic effects in the reaction of a polynuclear aromatic diol epoxide with oligodeoxynucleotides in aqueous solutions

1 reference

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11 July 2018

Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes

1 reference

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Reduced surface: an efficient way to compute molecular surfaces

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Classical electrostatics in biology and chemistry

1 reference

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11 July 2018

Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG

1 reference

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11 July 2018

Oxidation of guanine and 8-oxo-7,8-dihydroguanine by carbonate radical anions: insight from oxygen-18 labeling experiments

1 reference

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Deformations of promoter DNA bound to carcinogens help interpret effects on TATA-element structure and activity

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Nucleotide excision repair from site-specifically platinum-modified nucleosomes.

1 reference

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Radiation-induced formation of a crosslink between base moieties of deoxyguanosine and thymidine in deoxygenated solutions of d(CpGpTpA)

1 reference

https://pubmed.ncbi.nlm.nih.gov/22135299

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A modified version of the Cornell et al. force field with improved sugar pucker phases and helical repeat

1 reference

https://pubmed.ncbi.nlm.nih.gov/22135299

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKR1087

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

10 August 2017

ResearchGate publication ID

0 references

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