Minireview: structural insights into early folding events using continuous-flow time-resolved small-angle X-ray scattering (Q35753025)

10 August 2017

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title

Minireview: structural insights into early folding events using continuous-flow time-resolved small-angle X-ray scattering (English)

1 reference

X-ray scattering techniques

10 August 2017

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Sagar V Kathuria

1

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10 August 2017

Liang Guo

2

1 reference

10 August 2017

Rita Graceffa

3

1 reference

10 August 2017

Raul Barrea

4

1 reference

10 August 2017

R Paul Nobrega

5

1 reference

10 August 2017

C Robert Matthews

6

1 reference

10 August 2017

Thomas C Irving

7

1 reference

10 August 2017

Osman Bilsel

8

1 reference

10 August 2017

25 March 2011

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10 August 2017

1 reference

10 August 2017

95

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10 August 2017

8

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10 August 2017

550-558

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The folding of single domain proteins--have we reached a consensus?

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Atomic-level characterization of the structural dynamics of proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

From the Cover: Charge interactions can dominate the dimensions of intrinsically disordered proteins.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Protein structural dynamics in solution unveiled via 100-ps time-resolved x-ray scattering

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Net charge per residue modulates conformational ensembles of intrinsically disordered proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1-39)

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Constructing the equilibrium ensemble of folding pathways from short off-equilibrium simulations.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Collapse transition in proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

A molecular ruler for measuring quantitative distance distributions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Effects of denaturants and osmolytes on proteins are accurately predicted by the molecular transfer model

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Microsecond acquisition of heterogeneous structure in the folding of a TIM barrel protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

NMR analysis of partially folded states and persistent structure in the alpha subunit of tryptophan synthase: implications for the equilibrium folding mechanism of a 29-kDa TIM barrel protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Protein folding studied by single-molecule FRET.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

On the role of structural class of a protein with two-state folding kinetics in determining correlations between its size, topology, and folding rate

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

A helical structural nucleus is the primary elongating unit of insulin amyloid fibrils

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Structural characterization of flexible proteins using small-angle X-ray scattering

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

A tightly packed hydrophobic cluster directs the formation of an off-pathway sub-millisecond folding intermediate in the alpha subunit of tryptophan synthase, a TIM barrel protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Early events in protein folding explored by rapid mixing methods

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Statistical coil model of the unfolded state: resolving the reconciliation problem

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

The study of protein folding and dynamics by determination of intramolecular distance distributions and their fluctuations using ensemble and single-molecule FRET measurements

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Specific collapse followed by slow hydrogen-bond formation of beta-sheet in the folding of single-chain monellin

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Reassessing random-coil statistics in unfolded proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Random-coil behavior and the dimensions of chemically unfolded proteins

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Ensemble approach for NMR structure refinement against (1)H paramagnetic relaxation enhancement data arising from a flexible paramagnetic group attached to a macromolecule

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

The protein folding 'speed limit'.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Collapse and search dynamics of apomyoglobin folding revealed by submillisecond observations of alpha-helical content and compactness.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Conformational landscape of cytochrome c folding studied by microsecond-resolved small-angle x-ray scattering.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Fast kinetics and mechanisms in protein folding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Compactness of the denatured state of a fast-folding protein measured by submillisecond small-angle x-ray scattering

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

A continuous-flow capillary mixing method to monitor reactions on the microsecond time scale.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Submillisecond protein folding kinetics studied by ultrarapid mixing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Biotechnology at low Reynolds numbers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Detection of transient interchain interactions in the intrinsically disordered protein alpha-synuclein by NMR paramagnetic relaxation enhancement

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

The unfolded state of the C-terminal domain of the ribosomal protein L9 contains both native and non-native structure

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Remeasuring the double helix

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Protein denaturation: a small-angle X-ray scattering study of the ensemble of unfolded states of cytochrome c.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Early intermediates in the folding of dihydrofolate reductase from Escherichia coli detected by hydrogen exchange and NMR

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3278217

Small-angle scattering studies of biological macromolecules in solution

12 July 2018

1 reference

Explicit treatment of spin labels in modeling of distance constraints from dipolar EPR and DEER.

21 January 2018

1 reference

A structure refinement protocol combining NMR residual dipolar couplings and small angle scattering restraints

21 January 2018

1 reference

Microsecond hydrophobic collapse in the folding of Escherichia coli dihydrofolate reductase, an alpha/beta-type protein.

21 January 2018

1 reference

Achieving uniform mixing in a microfluidic device: hydrodynamic focusing prior to mixing.

21 January 2018

1 reference

Improvements in mixing time and mixing uniformity in devices designed for studies of protein folding kinetics

21 January 2018

1 reference

Long-range interactions within a nonnative protein

21 January 2018

1 reference

Early collapse is not an obligate step in protein folding.

21 January 2018

1 reference

Time-resolved small-angle X-ray scattering study of the folding dynamics of barnase

21 January 2018

1 reference

Specifically collapsed intermediate in the early stage of the folding of ribonuclease A.

21 January 2018

1 reference

Time-resolved small-angle X-ray scattering investigation of the folding dynamics of heme oxygenase: implication of the scaling relationship for the submillisecond intermediates of protein folding.

21 January 2018

1 reference

Specific structure appears at the N terminus in the sub-millisecond folding intermediate of the alpha subunit of tryptophan synthase, a TIM barrel protein

21 January 2018

1 reference

Principles of Fluorescence Spectroscopy

21 January 2018

1 reference

Localized, stereochemically sensitive hydrophobic packing in an early folding intermediate of dihydrofolate reductase from Escherichia coli

21 January 2018

1 reference

12 December 2020

Computational simulation of the statistical properties of unfolded proteins

1 reference

12 December 2020

Folding of cytochrome c initiated by submillisecond mixing

1 reference

12 December 2020

Characterization of transient intermediates in lysozyme folding with time-resolved small-angle X-ray scattering

1 reference

12 December 2020

Chain collapse can occur concomitantly with the rate-limiting step in protein folding

1 reference

12 December 2020

Mapping the folding free energy surface for metal-free human Cu,Zn superoxide dismutase

1 reference

12 December 2020

Rapid prototyping of X-ray microdiffraction compatible continuous microflow foils

1 reference

12 December 2020

Identifiers

DOI

10.1002/BIP.21628

1 reference

release_xpcgquzbkrdnvgw2icqk7sis5e

10 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xpcgquzbkrdnvgw2icqk7sis5e

24 November 2022

mapped directly with Wikidata item

PMCID

3278217

1 reference

10 August 2017

1 reference