Dissection of complex protein dynamics in human thioredoxin (Q35720786)

9 August 2017

Dissection of complex protein dynamics in human thioredoxin (English)

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9 August 2017

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Weihong Qiu

1

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9 August 2017

Lijuan Wang

2

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9 August 2017

Wenyun Lu

3

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9 August 2017

Amanda Boechler

4

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9 August 2017

David A R Sanders

5

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9 August 2017

Dongping Zhong

6

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9 August 2017

language of work or name

English

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publication date

16 March 2007

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9 August 2017

6

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Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

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9 August 2017

104

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9 August 2017

13

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9 August 2017

5366-5371

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Protein folding is slaved to solvent motions

9 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

The dynamic energy landscape of dihydrofolate reductase catalysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Protein surface hydration mapped by site-specific mutations.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Advances in time-resolved approaches to characterize the dynamical nature of enzymatic catalysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

4D ultrafast electron diffraction, crystallography, and microscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Dependence of tryptophan emission wavelength on conformation in cyclic hexapeptides

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Direct observation of thymine dimer repair in DNA by photolyase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Diffraction, crystallography and microscopy beyond three dimensions: structural dynamics in space and time

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Energy landscapes and solved protein-folding problems.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Bulk-solvent and hydration-shell fluctuations, similar to alpha- and beta-fluctuations in glasses, control protein motions and functions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Conformational effects on tryptophan fluorescence in cyclic hexapeptides

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Slaving: solvent fluctuations dominate protein dynamics and functions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Hydration at the surface of the protein Monellin: dynamics with femtosecond resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Biological water at the protein surface: dynamical solvation probed directly with femtosecond resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Femtosecond dynamics of rubredoxin: tryptophan solvation and resonance energy transfer in the protein.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Femtosecond dynamics of flavoproteins: charge separation and recombination in riboflavine (vitamin B2)-binding protein and in glucose oxidase enzyme

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Mechanisms of tryptophan fluorescence shifts in proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Femtochemistry: Atomic-Scale Dynamics of the Chemical Bond Using Ultrafast Lasers (Nobel Lecture) Copyright((c)) The Nobel Foundation 2000. We thank the Nobel Foundation, Stockholm, for permission to print this lecture

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

12 July 2018

Thioredoxin reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Human thioredoxin homodimers: regulation by pH, role of aspartate 60, and crystal structure of the aspartate 60 --> asparagine mutant

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Cell growth stimulation by the redox protein thioredoxin occurs by a novel helper mechanism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Crystal structures of reduced, oxidized, and mutated human thioredoxins: evidence for a regulatory homodimer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Ultra-fast excited state dynamics in green fluorescent protein: multiple states and proton transfer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Site-directed mutagenesis of active site cysteines in human thioredoxin produces competitive inhibitors of human thioredoxin reductase and elimination of mitogenic properties of thioredoxin.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

13C NMR and fluorescence analysis of tryptophan dynamics in wild-type and two single-Trp variants of Escherichia coli thioredoxin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Thioredoxin. A localized conformational change accompanying reduction of the protein to the sulfhydryl form

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Thioredoxin and glutaredoxin systems

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Crystal structure of thioredoxin from Escherichia coli at 1.68 A resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Motion of aromatic side chains, picosecond fluorescence, and internal energy transfer in Escherichia coli thioredoxin studied by site-directed mutagenesis, time-resolved fluorescence spectroscopy, and molecular dynamics simulations

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

The Energy Landscapes and Motions of Proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Two-dimensional spectroscopy of electronic couplings in photosynthesis

12 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Proton sharing between cysteine thiols in Escherichia coli thioredoxin: implications for the mechanism of protein disulfide reduction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Femtosecond studies of tryptophan fluorescence dynamics in proteins: local solvation and electronic quenching.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Fluorescence of the single tryptophan of cutinase: temperature and pH effect on protein conformation and dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Quenching of tryptophan fluorescence by the active-site disulfide bridge in the DsbA protein from Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Ultrafast hydration dynamics in melittin folding and aggregation: helix formation and tetramer self-assembly

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1838516

Mismatch Binding Protein-Based Mutation Detection Systems

25 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0608498104

Properties and biological activities of thioredoxins

21 January 2018

1 reference

12 December 2020

Picosecond tryptophan fluorescence of thioredoxin: evidence for discrete species in slow exchange

1 reference

12 December 2020

Tryptophan fluorescence study of conformational transitions of the oxidized and reduced form of thioredoxin

1 reference

12 December 2020

Purification, crystallization and preliminary X-ray analysis of an unusual thioredoxin from the gastric pathogen Helicobacter pylori

1 reference

12 December 2020

Ultrafast hydration dynamics in the lipidic cubic phase: Discrete water structures in nanochannels

1 reference

12 December 2020

Conservation of cys-cys trp structural triads and their geometry in the protein domains of immunoglobulin superfamily members

1 reference

12 December 2020

Ultrafast solvation dynamics of human serum albumin: correlations with conformational transitions and site-selected recognition

1 reference

12 December 2020

Thioredoxin and thioredoxin reductase

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0608498104

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9 August 2017

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9 August 2017

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