Correlation of deformability at a tRNA recognition site and aminoacylation specificity (Q35709565)

9 August 2017

title

Correlation of deformability at a tRNA recognition site and aminoacylation specificity (English)

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9 August 2017

K Y Chang

1

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9 August 2017

G Varani

2

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9 August 2017

S Bhattacharya

3

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9 August 2017

H Choi

4

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9 August 2017

W H McClain

5

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9 August 2017

language of work or name

English

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publication date

1 October 1999

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Proceedings of the National Academy of Sciences of the United States of America

9 August 2017

published in

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9 August 2017

volume

96

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9 August 2017

issue

21

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9 August 2017

page(s)

11764-11769

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describes a project that uses

9 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC18360/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Crystal structure of a 14 bp RNA duplex with non-symmetrical tandem GxU wobble base pairs

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

The importance of tRNA backbone-mediated interactions with synthetase for aminoacylation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Solution structure as a function of pH of two central mismatches, C . T and C . C, in the 29 to 39 K-ras gene sequence, by nuclear magnetic resonance and molecular dynamics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Crystal structure of an alternating octamer r(GUAUGUA)dC with adjacent G x U wobble pairs

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Variant minihelix RNAs reveal sequence-specific recognition of the helical tRNA(Ser) acceptor stem by E.coli seryl-tRNA synthetase.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

The crystal structure of the ternary complex of T.thermophilus seryl-tRNA synthetase with tRNA(Ser) and a seryl-adenylate analogue reveals a conformational switch in the active site

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

An RNA structure involved in feedback regulation of splicing and of translation is critical for biological fitness

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Compilation of tRNA sequences and sequences of tRNA genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

The active site of yeast aspartyl-tRNA synthetase: structural and functional aspects of the aminoacylation reaction

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

RNA structure, not sequence, determines the 5' splice-site specificity of a group I intron

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Association of transfer RNA acceptor identity with a helical irregularity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Direct analysis of aminoacylation levels of tRNAs in vivo. Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

RNA structure and NMR spectroscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=18360

Changing the identity of a tRNA by introducing a G-U wobble pair near the 3' acceptor end.

12 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

Identity elements for specific aminoacylation of yeast tRNA(Asp) by cognate aspartyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

A simple structural feature is a major determinant of the identity of a transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

Functional evidence for indirect recognition of G.U in tRNA(Ala) by alanyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

The reliability of in vivo structure-function analysis of tRNA aminoacylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

Specificity for aminoacylation of an RNA helix: an unpaired, exocyclic amino group in the minor groove

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

'Distorted' RNA helix recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

A single base pair affects binding and catalytic parameters in the molecular recognition of a transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

Crystallographic refinement of yeast aspartic acid transfer RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

Structural and dynamic helix geometry alterations induced by mismatch base pairs in double-helical RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.96.21.11764

21 January 2018

Identifiers

DOI

10.1073/PNAS.96.21.11764

1 reference

9 August 2017

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9 August 2017

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