Scaffolding of a bacterial genome using MinION nanopore sequencing (Q35684645)

9 August 2017

Scaffolding of a bacterial genome using MinION nanopore sequencing (English)

1 reference

9 August 2017

3

A Sjödin

1 reference

9 August 2017

A Lärkeryd

2

0 references

Edvin Karlsson

object named as

E Karlsson

series ordinal

1

0 references

author name string

M Forsman

series ordinal

4

1 reference

PubMed ID

26149338

9 August 2017

P Stenberg

series ordinal

5

1 reference

PubMed ID

26149338

9 August 2017

language of work or name

English

0 references

publication date

7 July 2015

1 reference

9 August 2017

1 reference

9 August 2017

5

1 reference

9 August 2017

11996

1 reference

Creative Commons Attribution 4.0 International

9 August 2017

start time

7 July 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/srep11996

0 references

cites work

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

A complete bacterial genome assembled de novo using only nanopore sequencing data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Complete Genome Sequence of Francisella endociliophora Strain FSC1006, Isolated from a Laboratory Culture of the Marine Ciliate Euplotes raikovi

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

First Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Typhimurium Strain ATCC 13311 (NCTC 74), a Reference Strain of Multidrug Resistance, as Achieved by Use of PacBio Single-Molecule Real-Time Technology.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Complete Genome Sequence of Pelosinus sp. Strain UFO1 Assembled Using Single-Molecule Real-Time DNA Sequencing Technology

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

A Benchmark Study on Error Assessment and Quality Control of CCS Reads Derived from the PacBio RS

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Characterizing and measuring bias in sequence data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Genome characterisation of the genus Francisella reveals insight into similar evolutionary paths in pathogens of mammals and fish

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Performance comparison of benchtop high-throughput sequencing platforms

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

A flexible and efficient template format for circular consensus sequencing and SNP detection

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Parameters for accurate genome alignment

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Molecular evolutionary consequences of niche restriction in Francisella tularensis, a facultative intracellular pathogen

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Real-time DNA sequencing from single polymerase molecules

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

Basic local alignment search tool

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4493687

DNA sequencing with nanopores

12 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSREP11996

21 January 2018

Identifiers

DOI

10.1038/SREP11996

1 reference

9 August 2017

1 reference

9 August 2017

1 reference

PubMed ID

26149338