High-throughput and quantitative procedure for determining sources of Escherichia coli in waterways by using host-specific DNA marker genes (Q35642012)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

22 December 2019

title

High-throughput and quantitative procedure for determining sources of Escherichia coli in waterways by using host-specific DNA marker genes (English)

1 reference

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22 December 2019

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3

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22 December 2019

author name string

Tao Yan

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

22 December 2019

Matthew J Hamilton

series ordinal

2

1 reference

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22 December 2019

language of work or name

English

0 references

publication date

8 December 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

Applied and Environmental Microbiology

22 December 2019

published in

1 reference

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22 December 2019

volume

73

1 reference

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22 December 2019

issue

3

1 reference

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22 December 2019

page(s)

890-896

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water

22 December 2019

cites work

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Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples

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Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways

27 July 2018

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27 July 2018

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Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds.

27 July 2018

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Evaluation of antibiotic resistance analysis and ribotyping for identification of faecal pollution sources in an urban watershed

27 July 2018

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Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification

27 July 2018

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Microplate subtractive hybridization to enrich for bacteroidales genetic markers for fecal source identification

27 July 2018

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Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking

27 July 2018

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Comparison of seven protocols to identify fecal contamination sources using Escherichia coli

27 July 2018

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Assessment of statistical methods used in library-based approaches to microbial source tracking

27 July 2018

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Evaluation of microbial source tracking methods using mixed fecal sources in aqueous test samples.

27 July 2018

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Sample size, library composition, and genotypic diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution

27 July 2018

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Teschoviruses as Indicators of Porcine Fecal Contamination of Surface Water

27 July 2018

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Microbial source tracking: state of the science

27 July 2018

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Microbial source tracking: current methodology and future directions

27 July 2018

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Bovine enteroviruses as indicators of fecal contamination

27 July 2018

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Development of a procedure for discriminating among Escherichia coli isolates from animal and human sources

27 July 2018

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Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California

27 July 2018

1 reference

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A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800753

Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800753

Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations

27 July 2018

1 reference

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Use of repetitive DNA sequences and the PCR To differentiate Escherichia coli isolates from human and animal sources

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800753

Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800753

Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800753

Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay

27 July 2018

1 reference

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Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters.

27 July 2018

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Microbial impact of Canada geese (Branta canadensis) and whistling swans (Cygnus columbianus columbianus) on aquatic ecosystems

27 July 2018

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Detection of the nifH gene of Methanobrevibacter smithii: a potential tool to identify sewage pollution in recreational waters.

27 July 2018

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A biomarker for the identification of swine fecal pollution in water, using the STII toxin gene from enterotoxigenic Escherichia coli

25 September 2018

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Use of antibiotic resistance analysis for representativeness testing of multiwatershed libraries

25 September 2018

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A biomarker for the identification of cattle fecal pollution in water using the LTIIa toxin gene from enterotoxigenic Escherichia coli

25 September 2018

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Sorbitol-fermenting bifidobacteria as indicators of diffuse human faecal pollution in estuarine watersheds

25 September 2018

1 reference

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Seasonal study of a freshwater lake and migratory waterfowl for Campylobacter jejuni

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17158618

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Potential use of a host associated molecular marker in Enterococcus faecium as an index of human fecal pollution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17158618

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.01395-06

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

22 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17158618%20AND%20SRC:MED&resulttype=core&format=json

22 December 2019

PubMed publication ID

17158618

1 reference