Activation and repression functions of an SR splicing regulator depend on exonic versus intronic-binding position (Q35633621)

9 August 2017

Activation and repression functions of an SR splicing regulator depend on exonic versus intronic-binding position (English)

1 reference

9 August 2017

2

William Mattox

1 reference

9 August 2017

Manli Shen

1

1 reference

PubMed ID

21914724

9 August 2017

language of work or name

English

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publication date

13 September 2011

1 reference

9 August 2017

10

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based on heuristic

inferred from page(s)

published in

Nucleic Acids Research

1 reference

9 August 2017

40

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9 August 2017

428-437

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9 August 2017

1

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Creative Commons Attribution-NonCommercial 3.0 Unported

9 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3245930/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Quantitative evaluation of all hexamers as exonic splicing elements

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Interaction between the RNA binding domains of Ser-Arg splicing factor 1 and U1-70K snRNP protein determines early spliceosome assembly

12 July 2018

1 reference

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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1

12 July 2018

1 reference

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Identification of MBNL1 and MBNL3 domains required for splicing activation and repression

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB.

12 July 2018

1 reference

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12 July 2018

The SR protein family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Cancer-associated regulation of alternative splicing

12 July 2018

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An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

12 July 2018

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Conservation of the protein composition and electron microscopy structure of Drosophila melanogaster and human spliceosomal complexes

12 July 2018

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HITS-CLIP yields genome-wide insights into brain alternative RNA processing

12 July 2018

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Phosphorylation switches the general splicing repressor SRp38 to a sequence-specific activator.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The splicing regulators Tra and Tra2 are unusually potent activators of pre-mRNA splicing.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The doublesex splicing enhancer components Tra2 and Rbp1 also repress splicing through an intronic silencer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Concentration dependent selection of targets by an SR splicing regulator results in tissue-specific RNA processing.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Distribution of SR protein exonic splicing enhancer motifs in human protein-coding genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Negative feedback regulation among SR splicing factors encoded by Rbp1 and Rbp1-like in Drosophila

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Identification of CELF splicing activation and repression domains in vivo

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Exon repression by polypyrimidine tract binding protein

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Direct repression of splicing by transformer-2.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Mechanisms of alternative pre-messenger RNA splicing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The SR protein SRp38 represses splicing in M phase cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Human splicing factor ASF/SF2 encodes for a repressor domain required for its inhibitory activity on pre-mRNA splicing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The role of U2AF35 and U2AF65 in enhancer-dependent splicing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Polypyrimidine tract-binding protein positively regulates inclusion of an alternative 3'-terminal exon

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

A systematic analysis of the factors that determine the strength of pre-mRNA splicing enhancers.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Crystal structure of the spliceosomal U2B"-U2A' protein complex bound to a fragment of U2 small nuclear RNA

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Arginine/serine-rich domains of SR proteins can function as activators of pre-mRNA splicing.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

SR protein and snRNP requirements for assembly of the Rous sarcoma virus negative regulator of splicing complex in vitro

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Control of male sexual behavior and sexual orientation in Drosophila by the fruitless gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Assembly of specific SR protein complexes on distinct regulatory elements of the Drosophila doublesex splicing enhancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

A negative feedback mechanism revealed by functional analysis of the alternative isoforms of the Drosophila splicing regulator transformer-2

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Inhibition by SR proteins of splicing of a regulated adenovirus pre-mRNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The role of specific protein-RNA and protein-protein interactions in positive and negative control of pre-mRNA splicing by Transformer 2.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The Drosophila SR protein RBP1 contributes to the regulation of doublesex alternative splicing by recognizing RBP1 RNA target sequences.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

The control of alternative splicing at genes regulating sexual differentiation in D. melanogaster

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Autoregulation of the splicing of transcripts from the transformer-2 gene of Drosophila.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Regulation of doublesex pre-mRNA processing occurs by 3'-splice site activation.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Synergistic interactions between two distinct elements of a regulated splicing enhancer.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Mutants of the bacteriophage MS2 coat protein that alter its cooperative binding to RNA.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245930

Agarose gel separation/isolation of RNA-protein complexes

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21914724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKR713

1 reference

9 August 2017

1 reference

9 August 2017

1 reference

PubMed ID

21914724