Coordinated methyl-lysine erasure: structural and functional linkage of a Jumonji demethylase domain and a reader domain. (Q35596988)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21872465%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

title

Coordinated methyl-lysine erasure: structural and functional linkage of a Jumonji demethylase domain and a reader domain (English)

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11 February 2020

2

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11 February 2020

author name string

Anup K Upadhyay

series ordinal

1

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11 February 2020

Xing Zhang

series ordinal

3

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11 February 2020

Xiaodong Cheng

series ordinal

4

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11 February 2020

publication date

25 August 2011

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Current Opinion in Structural Biology

11 February 2020

published in

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11 February 2020

volume

21

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11 February 2020

issue

6

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11 February 2020

page(s)

750-760

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Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

11 February 2020

cites work

1 reference

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PKA-dependent regulation of the histone lysine demethylase complex PHF2-ARID5B

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Structural basis of SETD6-mediated regulation of the NF-kB network via methyl-lysine signaling

12 July 2018

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The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases

12 July 2018

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The C-terminal domain of RNA polymerase II is modified by site-specific methylation

12 July 2018

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Combinatorial readout of dual histone modifications by paired chromatin-associated modules

12 July 2018

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Molecular Mimicry and Ligand Recognition in Binding and Catalysis by the Histone Demethylase LSD1-CoREST Complex

12 July 2018

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Structural basis for human PHF2 Jumonji domain interaction with metal ions

12 July 2018

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A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability

12 July 2018

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Lysine methylation of the NF-κB subunit RelA by SETD6 couples activity of the histone methyltransferase GLP at chromatin to tonic repression of NF-κB signaling

12 July 2018

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Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase

12 July 2018

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Structural insights into histone lysine demethylation

12 July 2018

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Reading, writing and editing methylated lysines on histone tails: new insights from recent structural studies

12 July 2018

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Structural studies on human 2-oxoglutarate dependent oxygenases

12 July 2018

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PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression

12 July 2018

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Histone H4K20/H3K9 demethylase PHF8 regulates zebrafish brain and craniofacial development

12 July 2018

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Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans

12 July 2018

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PHF8 targets histone methylation and RNA polymerase II to activate transcription.

12 July 2018

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CpG islands recruit a histone H3 lysine 36 demethylase

12 July 2018

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CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

12 July 2018

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The SNAG domain of Snail1 functions as a molecular hook for recruiting lysine-specific demethylase 1

12 July 2018

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Crystal structure of the FTO protein reveals basis for its substrate specificity

12 July 2018

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A functional link between the histone demethylase PHF8 and the transcription factor ZNF711 in X-linked mental retardation

12 July 2018

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Phosphorylation of histone H3T6 by PKCbeta(I) controls demethylation at histone H3K4

12 July 2018

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Coordinated chromatin control: structural and functional linkage of DNA and histone methylation

12 July 2018

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PHF8 activates transcription of rRNA genes through H3K4me3 binding and H3K9me1/2 demethylation

12 July 2018

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Histone variants--ancient wrap artists of the epigenome

12 July 2018

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KDM7 is a dual demethylase for histone H3 Lys 9 and Lys 27 and functions in brain development

12 July 2018

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Recognition of histone H3K4 trimethylation by the plant homeodomain of PHF2 modulates histone demethylation

12 July 2018

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Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases

12 July 2018

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PHF8, a gene associated with cleft lip/palate and mental retardation, encodes for an Nepsilon-dimethyl lysine demethylase

12 July 2018

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KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints

12 July 2018

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Jmjd6 catalyses lysyl-hydroxylation of U2AF65, a protein associated with RNA splicing

12 July 2018

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Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger

12 July 2018

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A novel mammalian flavin-dependent histone demethylase

12 July 2018

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

12 July 2018

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The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation

12 July 2018

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Lid2 is required for coordinating H3K4 and H3K9 methylation of heterochromatin and euchromatin

12 July 2018

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Formation of nucleoprotein filaments by mammalian DNA methyltransferase Dnmt3a in complex with regulator Dnmt3L.

12 July 2018

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

12 July 2018

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Cracking the RNA polymerase II CTD code

12 July 2018

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The ARID domain of the H3K4 demethylase RBP2 binds to a DNA CCGCCC motif

12 July 2018

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The ankyrin repeats of G9a and GLP histone methyltransferases are mono- and dimethyllysine binding modules

12 July 2018

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Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor

12 July 2018

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p53 is regulated by the lysine demethylase LSD1

12 July 2018

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Functional analysis of the transcription repressor PLU-1/JARID1B.

12 July 2018

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Recognition of unmethylated histone H3 lysine 4 links BHC80 to LSD1-mediated gene repression

12 July 2018

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DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

12 July 2018

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Crystal structures of histone demethylase JMJD2A reveal basis for substrate specificity

12 July 2018

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Structural basis of LSD1-CoREST selectivity in histone H3 recognition

12 July 2018

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The retinoblastoma binding protein RBP2 is an H3K4 demethylase

12 July 2018

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The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases

12 July 2018

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Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one?

12 July 2018

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Direct spectroscopic detection of a C-H-cleaving high-spin Fe(IV) complex in a prolyl-4-hydroxylase

12 July 2018

1 reference

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JmjC-domain-containing proteins and histone demethylation

12 July 2018

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

12 July 2018

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Recognition of histone H3 lysine-4 methylation by the double tudor domain of JMJD2A

12 July 2018

1 reference

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Histone demethylation by a family of JmjC domain-containing proteins

12 July 2018

1 reference

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Regulation of LSD1 histone demethylase activity by its associated factors

12 July 2018

1 reference

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LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription

12 July 2018

1 reference

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An essential role for CoREST in nucleosomal histone 3 lysine 4 demethylation

12 July 2018

1 reference

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Methylation: lost in hydroxylation?

12 July 2018

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Histone demethylation mediated by the nuclear amine oxidase homolog LSD1

12 July 2018

1 reference

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Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center

12 July 2018

1 reference

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A novel jmjC domain protein modulates heterochromatization in fission yeast

12 July 2018

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Coordinated histone modifications mediated by a CtBP co-repressor complex

12 July 2018

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Structure of factor-inhibiting hypoxia-inducible factor (HIF) reveals mechanism of oxidative modification of HIF-1 alpha

12 July 2018

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AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli

12 July 2018

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Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage

12 July 2018

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LCX, leukemia-associated protein with a CXXC domain, is fused to MLL in acute myeloid leukemia with trilineage dysplasia having t(10;11)(q22;q23).

12 July 2018

1 reference

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Histone methylation: dynamic or static?

12 July 2018

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5-hydroxymethylcytosine DNA glycosylase activity in mammalian tissue

12 July 2018

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Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.

12 July 2018

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Human histone demethylase LSD1 reads the histone code

26 September 2018

1 reference

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TET1, a member of a novel protein family, is fused to MLL in acute myeloid leukemia containing the t(10;11)(q22;q23).

26 September 2018

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10.1016/J.SBI.2011.08.003

26 September 2018

Identifiers

DOI

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11 February 2020

1 reference

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11 February 2020

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