Global assessment of GU-rich regulatory content and function in the human transcriptome (Q35578540)

9 August 2017

Global assessment of GU-rich regulatory content and function in the human transcriptome (English)

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9 August 2017

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Edward Hitti

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Anason Halees

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Anason S Halees

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Paul R Bohjanen

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Paul R Bohjanen

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Edward Hitti

2

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9 August 2017

Maher Al-Saif

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9 August 2017

Linah Mahmoud

4

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9 August 2017

Irina A Vlasova-St Louis

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9 August 2017

Daniel J Beisang

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9 August 2017

Khalid Khabar

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9 August 2017

1 July 2011

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9 August 2017

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9 August 2017

681-691

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9 August 2017

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Systematic analysis of cis-elements in unstable mRNAs demonstrates that CUGBP1 is a key regulator of mRNA decay in muscle cells

9 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Post-transcriptional control during chronic inflammation and cancer: a focus on AU-rich elements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

A versatile ribosomal protein promoter-based reporter system for selective assessment of RNA stability and post-transcriptional control

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Pathogenic mechanisms of myotonic dystrophy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

RNA gain-of-function in spinocerebellar ataxia type 8.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Alternative polyadenylation variants of the RNA binding protein, HuR: abundance, role of AU-rich elements and auto-Regulation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Post-transcriptional gene regulation by MAP kinases via AU-rich elements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Cloning-free regulated monitoring of reporter and gene expression.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Database for mRNA half-life of 19 977 genes obtained by DNA microarray analysis of pluripotent and differentiating mouse embryonic stem cells

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Posttranscriptional regulation of gene networks by GU-rich elements and CELF proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

The RNA-binding protein CUGBP1 regulates stability of tumor necrosis factor mRNA in muscle cells: implications for myotonic dystrophy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Conserved GU-rich elements mediate mRNA decay by binding to CUG-binding protein 1

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

ARED Organism: expansion of ARED reveals AU-rich element cluster variations between human and mouse

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Bioinformatics and experimental derivation of an efficient hybrid 3' untranslated region and use in expression active linear DNA with minimum poly(A) region.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Regulation of Unr expression by 5'- and 3'-untranslated regions of its mRNA through modulation of stability and IRES mediated translation.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Protein expression is increased by a class III AU-rich element and tethered CUG-BP1

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

RNA CUG-binding protein 1 increases translation of 20-kDa isoform of CCAAT/enhancer-binding protein beta by interacting with the alpha and beta subunits of eukaryotic initiation translation factor 2.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

CUGBP2 plays a critical role in apoptosis of breast cancer cells in response to genotoxic injury

27 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

27 July 2018

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

ARED 2.0: an update of AU-rich element mRNA database.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

p38 Mitogen-activated protein kinase-dependent and -independent signaling of mRNA stability of AU-rich element-containing transcripts

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Genome-wide analysis of mRNA decay in resting and activated primary human T lymphocytes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

A repeat expansion in the gene encoding junctophilin-3 is associated with Huntington disease-like 2.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

Functional characterization of a non-AUUUA AU-rich element from the c-jun proto-oncogene mRNA: evidence for a novel class of AU-rich elements

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: the functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A).

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3225982

The nonamer UUAUUUAUU is the key AU-rich sequence motif that mediates mRNA degradation

27 July 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

ARED 3.0: the large and diverse AU-rich transcriptome.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

RNA-binding proteins and post-transcriptional gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

Analysis of CUGBP1 targets identifies GU-repeat sequences that mediate rapid mRNA decay

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

Post-transcriptional control of the level of mRNA by hepatitis B virus X gene in the transient expression system using human hepatic cells

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

Inhibition of the acute-phase response in a human hepatoma cell line

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

Overexpression of CUG triplet repeat-binding protein, CUGBP1, in mice inhibits myogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.4161%2FRNA.8.4.16283

21 January 2018

Identifiers

DOI

10.4161/RNA.8.4.16283

1 reference

9 August 2017

1 reference

9 August 2017

1 reference