Mechanism of tRNA-dependent editing in translational quality control (Q35576074)

8 August 2017

Mechanism of tRNA-dependent editing in translational quality control (English)

1 reference

8 August 2017

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Jiqiang Ling

1

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author name string

Hervé Roy

series ordinal

2

1 reference

PubMed ID

17185419

8 August 2017

Michael Ibba

series ordinal

3

1 reference

PubMed ID

17185419

8 August 2017

language of work or name

English

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publication date

21 December 2006

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Proceedings of the National Academy of Sciences of the United States of America

8 August 2017

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8 August 2017

104

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8 August 2017

1

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8 August 2017

72-77

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Structural and mutational studies of the amino acid-editing domain from archaeal/eukaryal phenylalanyl-tRNA synthetase

8 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Editing-defective tRNA synthetase causes protein misfolding and neurodegeneration

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Phenylalanyl-tRNA synthetase contains a dispensable RNA-binding domain that contributes to the editing of noncognate aminoacyl-tRNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Participation of the tRNA A76 hydroxyl groups throughout translation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Loss of editing activity during the evolution of mitochondrial phenylalanyl-tRNA synthetase.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Molecular basis of alanine discrimination in editing site

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Chemical rescue of I-site cleavage in living cells and in vitro discriminates between the cytomegalovirus protease, assemblin, and its precursor, pUL80a

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Chemical rescue of histidine selectivity filter mutants of the M2 ion channel of influenza A virus

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Post-transfer editing in vitro and in vivo by the beta subunit of phenylalanyl-tRNA synthetase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Structural and mechanistic basis of pre- and posttransfer editing by leucyl-tRNA synthetase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Elucidation of tRNA-dependent editing by a class II tRNA synthetase and significance for cell viability

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Transfer RNA-mediated editing in threonyl-tRNA synthetase. The class II solution to the double discrimination problem

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Hydrolytic editing by a class II aminoacyl-tRNA synthetase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Transfer RNA-dependent translocation of misactivated amino acids to prevent errors in protein synthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Functional characterization of the D-Tyr-tRNATyr deacylase from Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

The structure of threonyl-tRNA synthetase-tRNA(Thr) complex enlightens its repressor activity and reveals an essential zinc ion in the active site

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Crystal structures of phenylalanyl-tRNA synthetase complexed with phenylalanine and a phenylalanyl-adenylate analogue

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Enzyme structure with two catalytic sites for double-sieve selection of substrate

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Crystal structure at 1.2 A resolution and active site mapping of Escherichia coli peptidyl-tRNA hydrolase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Structure of phenylalanyl-tRNA synthetase from Thermus thermophilus

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Transfer Ribonucleic Acid-induced Hydrolysis of Valyladenylate Bound to Isoleucyl Ribonucleic Acid Synthetase

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Phenylalanyl-tRNA Synthetase and Isoleucyl-tRNA Phe : A Possible Verification Mechanism for Aminoacyl-tRNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 A.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Threonyl-tRNA synthetase from yeast Aminoacylation of tRNA on its non-accepting 3′-terminal hydroxyl group and its behaviour in enzyme-catalyzed deacylation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Discrete determinants in transfer RNA for editing and aminoacylation.

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Insights into editing from an ile-tRNA synthetase structure with tRNAile and mupirocin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Species-specific differences in amino acid editing by class II prolyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Structural basis for discrimination of L-phenylalanine from L-tyrosine by phenylalanyl-tRNA synthetase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Rescue of the catalytic activity of an H42A mutant of horseradish peroxidase by exogenous imidazoles

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Substrate specificity is determined by amino acid binding pocket size in Escherichia coli phenylalanyl-tRNA synthetase

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Plasticity of recognition of the 3'-end of mischarged tRNA by class I aminoacyl-tRNA synthetases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Mutational separation of two pathways for editing by a class I tRNA synthetase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

A conserved threonine within Escherichia coli leucyl-tRNA synthetase prevents hydrolytic editing of leucyl-tRNALeu

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Transiently Misacylated tRNA Is a Primer for Editing of Misactivated Adenylates by Class I Aminoacyl-tRNA Synthetases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Post-transfer editing mechanism of a D-aminoacyl-tRNA deacylase-like domain in threonyl-tRNA synthetase from archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Distinct kinetic mechanisms of the two classes of Aminoacyl-tRNA synthetases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

The tRNA specificity of Thermus thermophilus EF-Tu

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Predicting the binding affinities of misacylated tRNAs for Thermus thermophilus EF-Tu.GTP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0606272104

Achieving error-free translation; the mechanism of proofreading of threonyl-tRNA synthetase at atomic resolution

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Structure at 2.6 A resolution of phenylalanyl-tRNA synthetase complexed with phenylalanyl-adenylate in the presence of manganese

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765480

Identification and characterization of a catalytic base in bacterial luciferase by chemical rescue of a dark mutant

26 September 2018

1 reference

12 December 2020

A D-amino acid editing module coupled to the translational apparatus in archaea

1 reference

12 December 2020

Rapid Deacylation by Isoleucyl Transfer Ribonucleic Acid Synthetase of Isoleucine-specific Transfer Ribonucleic Acid Aminoacylated with Valine

1 reference

12 December 2020

Specific sequence homology and three-dimensional structure of an aminoacyl transfer RNA synthetase

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0606272104

1 reference

8 August 2017

0 references

1 reference

8 August 2017

1 reference

PubMed ID

17185419