Deep sequencing uncovers protistan plankton diversity in the Portuguese Ria Formosa solar saltern ponds (Q35486713)

8 August 2017

Deep sequencing uncovers protistan plankton diversity in the Portuguese Ria Formosa solar saltern ponds (English)

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8 August 2017

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3

Micah Dunthorn

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8 August 2017

5

Thorsten Stoeck

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8 August 2017

Sabine Filker

1

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PubMed ID

25472012

8 August 2017

Anna Gimmler

series ordinal

2

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PubMed ID

25472012

8 August 2017

Frédéric Mahé

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4

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8 August 2017

4 December 2014

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8 August 2017

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8 August 2017

19

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8 August 2017

2

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8 August 2017

283-295

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https://scigraph.springernature.com/pub.10.1007/s00792-014-0713-2

8 August 2017

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Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin

21 January 2018

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Microbiology: eukaryotic diversity in Spain's River of Fire.

21 January 2018

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A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes

21 January 2018

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Microbial community structure across the tree of life in the extreme Río Tinto

21 January 2018

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Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

21 January 2018

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Depicting more accurate pictures of protistan community complexity using pyrosequencing of hypervariable SSU rRNA gene regions.

21 January 2018

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A molecular time-scale for eukaryote evolution recalibrated with the continuous microfossil record

21 January 2018

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Cryptic species as a window on diversity and conservation

21 January 2018

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Fast, accurate error-correction of amplicon pyrosequences using Acacia.

21 January 2018

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Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA.

21 January 2018

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QIIME allows analysis of high-throughput community sequencing data

21 January 2018

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Marine protistan diversity

21 January 2018

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Defining DNA-based operational taxonomic units for microbial-eukaryote ecology

21 January 2018

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Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern

21 January 2018

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Microbial biodiversity in saline shallow lakes of the Monegros Desert, Spain

21 January 2018

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Morphology and molecular phylogeny of Trimyema koreanum n. sp., a ciliate from the hypersaline water of a solar saltern

21 January 2018

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Comparing the hyper-variable V4 and V9 regions of the small subunit rDNA for assessment of ciliate environmental diversity

21 January 2018

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Placing environmental next-generation sequencing amplicons from microbial eukaryotes into a phylogenetic context

21 January 2018

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Ciliates and the rare biosphere: a review

21 January 2018

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Search and clustering orders of magnitude faster than BLAST

21 January 2018

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Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea.

21 January 2018

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Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

21 January 2018

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Diversity of planktonic photoautotrophic microorganisms along a salinity gradient as depicted by microscopy, flow cytometry, pigment analysis and DNA-based methods

21 January 2018

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Morphology, ontogenesis and molecular phylogeny of Platynematum salinarum nov. spec., a new scuticociliate (Ciliophora, Scuticociliatia) from a solar saltern

21 January 2018

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Schmidingerothrix salinarum nov. spec. is the molecular sister of the large oxytrichid clade (ciliophora, hypotricha).

21 January 2018

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Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells

21 January 2018

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Fungal adaptation to extremely high salt concentrations.

21 January 2018

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Molecular phylogeny of euglyphid testate amoebae (Cercozoa: Euglyphida) suggests transitions between marine supralittoral and freshwater/terrestrial environments are infrequent

21 January 2018

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Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia

21 January 2018

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Soil fungal communities underneath willow canopies on a primary successional glacier forefront: rDNA sequence results can be affected by primer selection and chimeric data

21 January 2018

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Genomic adaptations of the halophilic Dead Sea filamentous fungus Eurotium rubrum

21 January 2018

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Geology. A new period for the geologic time scale

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Cultivation-independent analysis reveals a shift in ciliate 18S rRNA gene diversity in a polycyclic aromatic hydrocarbon-polluted soil

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Community structure and seasonal dynamics of planktonic ciliates along salinity gradients

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Infrequent marine-freshwater transitions in the microbial world.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Infrequent transitions between saline and fresh waters in one of the most abundant microbial lineages (SAR11).

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Global patterns in bacterial diversity

21 January 2018

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Targeted recovery of novel phylogenetic diversity from next-generation sequence data

21 January 2018

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Swarm: robust and fast clustering method for amplicon-based studies

21 January 2018

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Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

21 January 2018

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Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity

21 January 2018

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Delimiting operational taxonomic units for assessing ciliate environmental diversity using small-subunit rRNA gene sequences

21 January 2018

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JAGUC--a software package for environmental diversity analyses.

21 January 2018

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Microbial life at high salt concentrations: phylogenetic and metabolic diversity

21 January 2018

1 reference

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Characterization of halotolerant Bicosoecida and Placididea (Stramenopila) that are distinct from marine forms, and the phylogenetic pattern of salinity preference in heterotrophic stramenopiles

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Ultrastructure and phylogenetic placement within Heterolobosea of the previously unclassified, extremely halophilic heterotrophic flagellate Pleurostomum flabellatum (Ruinen 1938).

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Ultrastructure and molecular phylogeny of two heterolobosean amoebae, Euplaesiobystra hypersalinica gen. et sp. nov. and Tulamoeba peronaphora gen. et sp. nov., isolated from an extremely hypersaline habitat

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

The protozoa of a Western Australian hypersaline lagoon

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Molecular phylogeny and ontogeny of a new ciliate genus, Paracladotricha salina n. g., n. sp. (Ciliophora, Hypotrichia).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Microbial eukaryote life in the new hypersaline deep-sea basin Thetis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

A multiple PCR-primer approach to access the microeukaryotic diversity in environmental samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

High genetic diversity and novelty in planktonic protists inhabiting inland and coastal high salinity water bodies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Metabolism and metabolomics of eukaryotes living under extreme conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Active flagellates grazing on prokaryotes in high salinity waters of a solar saltern

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00792-014-0713-2

Salt-dependent properties of proteins from extremely halophilic bacteria

21 January 2018

1 reference

12 December 2020

Causes and consequences of recent freshwater invasions by saltwater animals

1 reference

12 December 2020

Diversity of free-living prokaryotes from a deep-sea site at the Antarctic Polar Front

1 reference

12 December 2020

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

1 reference

12 December 2020

10.1007/S00792-014-0713-2

Identifiers

DOI

1 reference

8 August 2017

1 reference

PubMed ID

25472012