HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements (Q35367054)

8 August 2017

HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements (English)

1 reference

8 August 2017

Chiao-Feng Lin

2

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author name string

Yih-Chii Hwang

1

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8 August 2017

Otto Valladares

3

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8 August 2017

John Malamon

4

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8 August 2017

Pavel P Kuksa

5

1 reference

8 August 2017

Qi Zheng

6

1 reference

8 August 2017

Brian D Gregory

7

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8 August 2017

Li-San Wang

8

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8 August 2017

language of work or name

English

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publication date

4 December 2014

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8 August 2017

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8 August 2017

31

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8 August 2017

8

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8 August 2017

1290-1292

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The UCSC Genome Browser database: 2014 update

8 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

A high-resolution map of the three-dimensional chromatin interactome in human cells

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

DRAW+SneakPeek: analysis workflow and quality metric management for DNA-seq experiments

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

High-throughput identification of long-range regulatory elements and their target promoters in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

Topological domains in mammalian genomes identified by analysis of chromatin interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

The Sequence Alignment/Map format and SAMtools

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

Fast and accurate short read alignment with Burrows-Wheeler transform

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393516

Integrative annotation of chromatin elements from ENCODE data

27 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU801

BEDTools: a flexible suite of utilities for comparing genomic features

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU801

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU801

10.1093/BIOINFORMATICS/BTU801

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/HwangLVMKZGW15

8 August 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

8 August 2017

1 reference