Competition between ADAR and RNAi pathways for an extensive class of RNA targets (Q35301426)

7 August 2017

Competition between ADAR and RNAi pathways for an extensive class of RNA targets (English)

1 reference

7 August 2017

Ayelet T Lamm

2

0 references

author name string

Diane Wu

series ordinal

1

1 reference

PubMed ID

21909095

7 August 2017

Andrew Z Fire

series ordinal

3

1 reference

7 August 2017

11 September 2011

1 reference

Nature Structural & Molecular Biology

7 August 2017

1 reference

7 August 2017

18

1 reference

7 August 2017

1094-1101

1 reference

7 August 2017

10

1 reference

https://scigraph.springernature.com/pub.10.1038/nsmb.2129

7 August 2017

0 references

cites work

Multimodal RNA-seq using single-strand, double-strand, and CircLigase-based capture yields a refined and extended description of the C. elegans transcriptome

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Elucidating the inosinome: global approaches to adenosine-to-inosine RNA editing

12 July 2018

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Adenosine-to-inosine RNA editing

12 July 2018

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Large-scale analysis of structural, sequence and thermodynamic characteristics of A-to-I RNA editing sites in human Alu repeats

12 July 2018

1 reference

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Alu sequences in undifferentiated human embryonic stem cells display high levels of A-to-I RNA editing

12 July 2018

1 reference

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Adenosine-to-inosine RNA editing shapes transcriptome diversity in primates

12 July 2018

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12 July 2018

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A survey of sequence alignment algorithms for next-generation sequencing

12 July 2018

1 reference

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ADAR editing in double-stranded UTRs and other noncoding RNA sequences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Unraveling pleiotropic functions of A-to-I RNA editing in Drosophila.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Functions and regulation of RNA editing by ADAR deaminases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Distinct phases of siRNA synthesis in an endogenous RNAi pathway in C. elegans soma.

12 July 2018

1 reference

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RNA editing genes associated with extreme old age in humans and with lifespan in C. elegans

12 July 2018

1 reference

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Adenosine-to-inosine genetic recoding is required in the adult stage nervous system for coordinated behavior in Drosophila

12 July 2018

1 reference

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Enhancing non-coding RNA information content with ADAR editing

12 July 2018

1 reference

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Recognition and coupling of A-to-I edited sites are determined by the tertiary structure of the RNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Editing independent effects of ADARs on the miRNA/siRNA pathways

12 July 2018

1 reference

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BSMAP: whole genome bisulfite sequence MAPping program

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Origins and evolution of ADAR-mediated RNA editing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

ADAR1 is essential for the maintenance of hematopoiesis and suppression of interferon signaling

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Gene regulation by SINES and inosines: biological consequences of A-to-I editing of Alu element inverted repeats

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

C. elegans and H. sapiens mRNAs with edited 3' UTRs are present on polysomes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

RNA editing of the serotonin 5HT2C receptor and its effects on cell signalling, pharmacology and brain function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Inosine-containing dsRNA binds a stress-granule-like complex and downregulates gene expression in trans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Distinct populations of primary and secondary effectors during RNAi in C. elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

RDE-4 preferentially binds long dsRNA and its dimerization is necessary for cleavage of dsRNA to siRNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Letter from the editor: Adenosine-to-inosine RNA editing in Alu repeats in the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Retention and repression: fates of hyperedited RNAs in the nucleus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

A survey of RNA editing in human brain

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Widespread RNA editing of embedded alu elements in the human transcriptome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Systematic identification of abundant A-to-I editing sites in the human transcriptome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Liver Disintegration in the Mouse Embryo Caused by Deficiency in the RNA-editing Enzyme ADAR1

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Stress-induced Apoptosis Associated with Null Mutation of ADAR1 RNA Editing Deaminase Gene

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Dynamic association of RNA-editing enzymes with the nucleolus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Gene silencing in Caenorhabditis elegans by transitive RNA interference.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

RNA editing by ADARs is important for normal behavior in Caenorhabditis elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

On the role of RNA amplification in dsRNA-triggered gene silencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

The rde-1 gene, RNA interference, and transposon silencing in C. elegans

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Regulation of serotonin-2C receptor G-protein coupling by RNA editing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Structure, reactivity, and biology of double-stranded RNA.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

ADARs have effects beyond RNA editing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Evidence for large diversity in the human transcriptome created by Alu RNA editing

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

A NEAT way of regulating nuclear export of mRNAs

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

The RISC subunit Tudor-SN binds to hyper-edited double-stranded RNA and promotes its cleavage

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Mutations in RNAi rescue aberrant chemotaxis of ADAR mutants

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

The role of RNA editing by ADARs in RNAi

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3190075

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

26 September 2018

1 reference

Integrative genomics viewer

21 January 2018

1 reference

Mouse models to elucidate the functional roles of adenosine-to-inosine editing

21 January 2018

1 reference

Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities

31 March 2020

1 reference

The human genome browser at UCSC

31 March 2020

1 reference

Base-calling of automated sequencer traces using phred. II. Error probabilities

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB.2129

1 reference

release_hhtoeo4gbnb63odibfunmcujhe

7 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/hhtoeo4gbnb63odibfunmcujhe

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

3190075

1 reference

7 August 2017

1 reference

PubMed ID

21909095