RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock. (Q35243430)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

1 reference

Rhizobium etli

1 reference

1 reference

1

1 reference

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Santiago Castillo-Ramírez

16 February 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

author name string

Maria Luisa Tabche

2

1 reference

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16 February 2020

Alfredo Mendoza-Vargas

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

Miguel A Ramírez-Romero

5

1 reference

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16 February 2020

Guillermo Dávila

6

1 reference

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16 February 2020

language of work or name

English

0 references

publication date

8 September 2014

1 reference

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16 February 2020

1 reference

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16 February 2020

volume

15

1 reference

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16 February 2020

page(s)

770

1 reference

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Canonical and non-canonical EcfG sigma factors control the general stress response in Rhizobium etli

16 February 2020

cites work

1 reference

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Convergence of the transcriptional responses to heat shock and singlet oxygen stresses

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27 July 2018

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The nodC, nodG, and glgX genes of Rhizobium tropici strain PRF 81.

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27 July 2018

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A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi

27 July 2018

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Role of the extracytoplasmic function sigma factor RpoE4 in oxidative and osmotic stress responses in Rhizobium etli

27 July 2018

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Transcription initiation by mix and match elements: flexibility for polymerase binding to bacterial promoters

27 July 2018

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Regulation by transcription factors in bacteria: beyond description

27 July 2018

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27 July 2018

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Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics

27 July 2018

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Trehalose biosynthesis in Rhizobium leguminosarum bv. trifolii and its role in desiccation tolerance

27 July 2018

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Responses of rhizobia to desiccation in relation to osmotic stress, oxygen, and temperature

27 July 2018

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Selection for unequal densities of sigma70 promoter-like signals in different regions of large bacterial genomes

27 July 2018

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Bacterial RNase P: a new view of an ancient enzyme

27 July 2018

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Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress

27 July 2018

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27 July 2018

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The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons

27 July 2018

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Effects of pH and Osmotic Stress on Cellular Polyamine Contents in the Soybean Rhizobia Rhizobium fredii P220 and Bradyrhizobium japonicum A1017.

27 July 2018

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27 July 2018

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Mutations in HlyD, part of the type 1 translocator for hemolysin secretion, affect the folding of the secreted toxin

27 July 2018

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27 July 2018

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27 July 2018

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Molecular cloning and characterization of cgt, the Brucella abortus cyclic beta-1,2-glucan transporter gene, and its role in virulence

27 July 2018

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The versatile bacterial type IV secretion systems

27 July 2018

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The regulation of bacterial transcription initiation

27 July 2018

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Trends between gene content and genome size in prokaryotic species with larger genomes

27 July 2018

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27 July 2018

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Polar Localization of Replicon Origins in the Multipartite Genomes of Agrobacterium tumefaciens and Sinorhizobium meliloti

27 July 2018

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Complete Genomic Sequence of Nitrogen-fixing Symbiotic Bacterium Bradyrhizobium japonicum USDA110

27 July 2018

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Proteome analysis in the study of the bacterial heat-shock response

27 July 2018

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Activation and repression of transcription initiation in bacteria

27 July 2018

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27 July 2018

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A mRNA-based thermosensor controls expression of rhizobial heat shock genes

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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Roles of the Escherichia coli small heat shock proteins IbpA and IbpB in thermal stress management: comparison with ClpA, ClpB, and HtpG In vivo

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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Influence of polyamines on membrane functions

27 July 2018

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27 July 2018

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Different plasmids of Rhizobium leguminosarum bv. phaseoli are required for optimal symbiotic performance

27 July 2018

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The DnaK chaperone modulates the heat shock response of Escherichia coli by binding to the sigma 32 transcription factor

27 July 2018

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27 July 2018

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21 January 2018

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Genome-wide detection of predicted non-coding RNAs in Rhizobium etli expressed during free-living and host-associated growth using a high-resolution tiling array

21 January 2018

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The composite genome of the legume symbiont Sinorhizobium meliloti

21 January 2018

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The PhyR-sigma(EcfG) signalling cascade is involved in stress response and symbiotic efficiency in Bradyrhizobium japonicum.

21 January 2018

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Rhizobium tropici genes involved in free-living salt tolerance are required for the establishment of efficient nitrogen-fixing symbiosis with Phaseolus vulgaris.

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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Comparative transcriptome analysis of Yersinia pestis in response to hyperosmotic and high-salinity stress

21 January 2018

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Antifolding activity of the SecB chaperone is essential for secretion of HasA, a quickly folding ABC pathway substrate

21 January 2018

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ATP-dependent transport systems in bacteria and humans: relevance to cystic fibrosis and multidrug resistance

21 January 2018

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21 January 2018

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Activity of Rhodobacter sphaeroides RpoHII, a second member of the heat shock sigma factor family.

21 January 2018

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Extensive functional overlap between sigma factors in Escherichia coli.

21 January 2018

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A new mathematical model for relative quantification in real-time RT-PCR

21 January 2018

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A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

21 January 2018

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The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses

26 September 2018

1 reference

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Promoter prediction in the rhizobia.

26 September 2018

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An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes.

26 September 2018

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In Rhizobium etli symbiotic plasmid transfer, nodulation competitivity and cellular growth require interaction among different replicons

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25201548

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-15-770

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25201548%20AND%20SRC:MED&resulttype=core&format=json