A four-way junction accelerates hairpin ribozyme folding via a discrete intermediate (Q35234480)

7 August 2017

A four-way junction accelerates hairpin ribozyme folding via a discrete intermediate (English)

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7 August 2017

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6

Taekjip Ha

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7 August 2017

3

Michelle K Nahas

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7 August 2017

Elliot Tan

1

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7 August 2017

Timothy J Wilson

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2

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7 August 2017

Robert M Clegg

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4

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7 August 2017

David M J Lilley

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5

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7 August 2017

language of work or name

English

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publication date

25 July 2003

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Proceedings of the National Academy of Sciences of the United States of America

7 August 2017

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7 August 2017

100

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7 August 2017

16

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7 August 2017

9308-9313

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Multiparameter single-molecule fluorescence spectroscopy reveals heterogeneity of HIV-1 reverse transcriptase:primer/template complexes.

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

The chemical repertoire of natural ribozymes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Correlating structural dynamics and function in single ribozyme molecules

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Metal ion binding and the folding of the hairpin ribozyme

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

The folding of the hairpin ribozyme: dependence on the loops and the junction

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Single-molecule protein folding: diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Tertiary structure stabilization promotes hairpin ribozyme ligation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Solution structure of the loop B domain from the hairpin ribozyme

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Single-molecule biomechanics with optical methods

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Single-molecule fluorescence spectroscopy of enzyme conformational dynamics and cleavage mechanism.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Tertiary structure formation in the hairpin ribozyme monitored by fluorescence resonance energy transfer

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Solution structure of loop A from the hairpin ribozyme from tobacco ringspot virus satellite

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Essential nucleotide sequences and secondary structure elements of the hairpin ribozyme

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=170914

Stability of hairpin ribozyme tertiary structure is governed by the interdomain junction

13 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Reversible unfolding of single RNA molecules by mechanical force

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Structural dynamics of individual Holliday junctions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

A Single-Molecule Study of RNA Catalysis and Folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Folding of branched RNA species

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Folding of the hairpin ribozyme in its natural conformation achieves close physical proximity of the loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Folding of the four-way RNA junction of the hairpin ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

Helical junctions as determinants for RNA folding: origin of tertiary structure stability of the hairpin ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1233536100

21 January 2018

Identifiers

DOI

10.1073/PNAS.1233536100

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7 August 2017

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7 August 2017

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