Amino acid-amino acid contacts at the cooperativity interface of the bacteriophage lambda and P22 repressors (Q35209206)

7 August 2017

Amino acid-amino acid contacts at the cooperativity interface of the bacteriophage lambda and P22 repressors (English)

1 reference

7 August 2017

1 reference

F W Whipple

1

1 reference

PubMed ID

9732276

7 August 2017

E F Hou

series ordinal

2

1 reference

PubMed ID

9732276

7 August 2017

A Hochschild

series ordinal

3

1 reference

7 August 2017

1 September 1998

1 reference

7 August 2017

1 reference

7 August 2017

12

1 reference

7 August 2017

17

1 reference

7 August 2017

2791-2802

1 reference

Genetic analysis of prokaryotic and eukaryotic DNA-binding proteins in Escherichia coli

7 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

The spacing between binding sites controls the mode of cooperative DNA-protein interactions: implications for evolution of regulatory circuitry

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Conversion of the omega subunit of Escherichia coli RNA polymerase into a transcriptional activator or an activation target

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Structural plasticity in a remodeled protein-protein interface

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Protein-protein communication: structural model of the repression complex formed by CytR and the global regulator CRP.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Protein-protein interaction: a genetic selection for compensating mutations at the barnase-barstar interface

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Structure of the UmuD' protein and its regulation in response to DNA damage

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

LexA cleavage and other self-processing reactions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Genetic selection for mutations that impair the co-operative binding of lambda repressor

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

DNA recognition by beta-sheets in the Arc repressor-operator crystal structure

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

The structural basis for the altered substrate specificity of the R292D active site mutant of aspartate aminotransferase from E. coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Protein-protein interactions: methods for detection and analysis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

The operator-binding domain of lambda repressor: structure and DNA recognition

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Analysis of gene control signals by DNA fusion and cloning in Escherichia coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Control of transcription by the bacteriophage P22 repressor.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Construction of plasmids that produce phage P22 repressor.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Mutant lambda phage repressor with a specific defect in its positive control function

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Mutations that alter the DNA sequence specificity of the catabolite gene activator protein of E. coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Cooperative binding of lambda repressors to sites separated by integral turns of the DNA helix

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Role of arginine-292 in the substrate specificity of aspartate aminotransferase as examined by site-directed mutagenesis.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Selective alteration of substrate specificity by replacement of aspartic acid-189 with lysine in the binding pocket of trypsin.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

umuDC and mucAB operons whose products are required for UV light- and chemical-induced mutagenesis: UmuD, MucA, and LexA proteins share homology

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

A single glutamic acid residue plays a key role in the transcriptional activation function of lambda repressor.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

P22 repressor mutants deficient in co-operative binding and DNA loop formation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Lambda repressor: a model system for understanding protein-DNA interactions and protein stability

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Cooperativity mutants of the gamma delta resolvase identify an essential interdimer interaction

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Random mutagenesis of gene-sized DNA molecules by use of PCR with Taq DNA polymerase

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Crystal structure of the met repressor-operator complex at 2.8 A resolution reveals DNA recognition by beta-strands

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Conditional-lethal mutations that suppress genetic defects in morphogenesis by altering structural proteins

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Maximizing gene expression on a plasmid using recombination in vitro

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

The lambda repressor contains two domains

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Interactions between DNA-bound repressors govern regulation by the λ phage repressor

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Mutations affecting cooperative DNA binding of phage HK022 CI repressor.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Activation of prokaryotic transcription through arbitrary protein-protein contacts.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Highly cooperative DNA binding by the coliphage HK022 repressor

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Target of the transcriptional activation function of phage lambda cI protein

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Changing the DNA-binding specificity of a repressor.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Why ion pair reversal by protein engineering is unlikely to succeed

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=317150

Homology among DNA-binding proteins suggests use of a conserved super-secondary structure

24 October 2018

1 reference

12 December 2020

Repressor structure and the mechanism of positive control

1 reference

12 December 2020

A new-specificity mutant of 434 repressor that defines an amino acid–base pair contact

1 reference

12 December 2020

Interaction at a distance between λrepressers disrupts gene activation

1 reference

12 December 2020

Isolation of lambda repressor mutants with defects in cooperative operator binding

1 reference

12 December 2020

Single-site mutations in the C-terminal domain of bacteriophage lambda cI repressor alter cooperative interactions between dimers adjacently bound to OR

1 reference

12 December 2020

Specificity determinants for the interaction of lambda repressor and P22 repressor dimers

1 reference

12 December 2020

Selective use of TBP and TFIIB revealed by a TATA-TBP-TFIIB array with altered specificity

1 reference

12 December 2020

Dimerization of the UmuD' protein in solution and its implications for regulation of SOS mutagenesis

1 reference

12 December 2020

Identifiers

DOI

10.1101/GAD.12.17.2791

1 reference

7 August 2017

1 reference

7 August 2017

1 reference

PubMed ID

9732276