Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana (Q35148365)

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English	Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

6 August 2017

Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana (English)

1 reference

Europe PubMed Central

6 August 2017

0 references

Arabidopsis thaliana

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8

object named as

Karl Mechtler

0 references

object named as

Jianhua Yang

6

0 references

author name string

Elisabeth Roitinger

1

1 reference

Europe PubMed Central

6 August 2017

Manuel Hofer

2

1 reference

Europe PubMed Central

6 August 2017

Thomas Köcher

3

1 reference

Europe PubMed Central

6 August 2017

Peter Pichler

4

1 reference

Europe PubMed Central

6 August 2017

Maria Novatchkova

5

1 reference

Europe PubMed Central

6 August 2017

Peter Schlögelhofer

7

1 reference

Europe PubMed Central

6 August 2017

publication date

5 January 2015

1 reference

Europe PubMed Central

6 August 2017

Molecular & Cellular Proteomics

1 reference

Europe PubMed Central

6 August 2017

14

1 reference

Europe PubMed Central

6 August 2017

3

1 reference

Europe PubMed Central

6 August 2017

556-571

1 reference

Europe PubMed Central

6 August 2017

Arabidopsis thaliana WAPL is essential for the prophase removal of cohesin during meiosis

1 reference

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28 July 2018

DNA damage response in plants: conserved and variable response compared to animals

1 reference

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The role of SOG1, a plant-specific transcriptional regulator, in the DNA damage response.

1 reference

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28 July 2018

Protein kinase CK2 is required for the recruitment of 53BP1 to sites of DNA double-strand break induced by radiomimetic drugs.

1 reference

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28 July 2018

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry

1 reference

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28 July 2018

Arabidopsis meiotic crossover hot spots overlap with H2A.Z nucleosomes at gene promoters

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28 July 2018

CHD chromatin remodelling enzymes and the DNA damage response.

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28 July 2018

Interplays between ATM/Tel1 and ATR/Mec1 in sensing and signaling DNA double-strand breaks

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28 July 2018

Another fork in the road--life or death decisions by the tumour suppressor p53

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28 July 2018

Quantitative phosphoproteomics after auxin-stimulated lateral root induction identifies an SNX1 protein phosphorylation site required for growth

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28 July 2018

Functional and transcriptome analysis reveals an acclimatization strategy for abiotic stress tolerance mediated by Arabidopsis NF-YA family members.

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Rapid phosphoproteomic and transcriptomic changes in the rhizobia-legume symbiosis

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28 July 2018

Characterization of the phosphoproteome of mature Arabidopsis pollen.

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28 July 2018

Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean

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28 July 2018

Modification site localization scoring: strategies and performance

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28 July 2018

Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes

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28 July 2018

ATM activation by oxidative stress

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28 July 2018

p53 post-translational modification: deregulated in tumorigenesis

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Strong cation exchange (SCX) based analytical methods for the targeted analysis of protein post-translational modifications

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28 July 2018

In planta changes in protein phosphorylation induced by the plant hormone abscisic acid

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Decoding signalling networks by mass spectrometry-based proteomics

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28 July 2018

Site-specific phosphorylation dynamics of the nuclear proteome during the DNA damage response

1 reference

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28 July 2018

Proteomics approaches to understand protein phosphorylation in pathway modulation

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28 July 2018

Two Prp19-like U-box proteins in the MOS4-associated complex play redundant roles in plant innate immunity

1 reference

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28 July 2018

Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage

1 reference

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28 July 2018

Common mechanisms of PIKK regulation

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Universal sample preparation method for proteome analysis

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The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry

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Mre11-Rad50-Nbs1-dependent processing of DNA breaks generates oligonucleotides that stimulate ATM activity

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Co-expression and promoter content analyses assign a role in biotic and abiotic stress responses to plant natriuretic peptides

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28 July 2018

Profiling of UV-induced ATM/ATR signaling pathways.

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28 July 2018

SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides

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28 July 2018

Mass spectrometry-based functional proteomics: from molecular machines to protein networks

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28 July 2018

An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets

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28 July 2018

Proteome-wide identification of in vivo targets of DNA damage checkpoint kinases

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28 July 2018

ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage

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28 July 2018

The Prp19/Pso4 core complex undergoes ubiquitylation and structural alterations in response to DNA damage

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28 July 2018

DNA double-strand break repair: all's well that ends well

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28 July 2018

Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination

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28 July 2018

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28 July 2018

The phosphoinositide-3-OH-kinase-related kinases of Arabidopsis thaliana

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28 July 2018

Functional contribution of Pds5 to cohesin-mediated cohesion in human cells and Xenopus egg extracts

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28 July 2018

Ionizing radiation-dependent gamma-H2AX focus formation requires ataxia telangiectasia mutated and ataxia telangiectasia mutated and Rad3-related

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28 July 2018

SQ/TQ cluster domains: concentrated ATM/ATR kinase phosphorylation site regions in DNA-damage-response proteins

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28 July 2018

Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins

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28 July 2018

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

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The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA

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28 July 2018

ATM deficiency and oxidative stress: a new dimension of defective response to DNA damage

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28 July 2018

Protein kinase CK2: structure, regulation and role in cellular decisions of life and death

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28 July 2018

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PA200, a nuclear proteasome activator involved in DNA repair

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28 July 2018

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28 July 2018

The Arabidopsis SKP1-LIKE1 gene is essential for male meiosis and may control homologue separation

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28 July 2018

Identification of an SCF ubiquitin-ligase complex required for auxin response in Arabidopsis thaliana

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28 July 2018

DNA double-stranded breaks induce histone H2AX phosphorylation on serine 139

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28 July 2018

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27 September 2018

Wapl is an essential regulator of chromatin structure and chromosome segregation

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27 September 2018

ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis.

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27 September 2018

Identification of Arabidopsis VTC3 as a putative and unique dual function protein kinase::protein phosphatase involved in the regulation of the ascorbic acid pool in plants

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27 September 2018

Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana

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27 September 2018

Phosphorylation of histone H2A is associated with centromere function and maintenance in meiosis

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27 September 2018

CK2-defective Arabidopsis plants exhibit enhanced double-strand break repair rates and reduced survival after exposure to ionizing radiation.

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27 September 2018

ATM protein physically and functionally interacts with proliferating cell nuclear antigen to regulate DNA synthesis

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27 September 2018

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27 September 2018

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27 September 2018

Glutathione deficiency of the Arabidopsis mutant pad2-1 affects oxidative stress-related events, defense gene expression, and the hypersensitive response.

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27 September 2018

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27 September 2018

PlantPhos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity

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27 September 2018

Arabidopsis REF6 is a histone H3 lysine 27 demethylase.

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27 September 2018

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27 September 2018

Mitogen-activated protein kinases 3 and 6 are required for full priming of stress responses in Arabidopsis thaliana.

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27 September 2018

DNA stress checkpoint control and plant development

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27 September 2018

Both ATM and ATR promote the efficient and accurate processing of programmed meiotic double-strand breaks.

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27 September 2018

The Arabidopsis SKP1 homolog ASK1 controls meiotic chromosome remodeling and release of chromatin from the nuclear membrane and nucleolus.

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27 September 2018

Characterization of the three Arabidopsis thaliana RAD21 cohesins reveals differential responses to ionizing radiation.

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27 September 2018

An Arabidopsis hAT-like transposase is essential for plant development.

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27 September 2018

ATR regulates a G2-phase cell-cycle checkpoint in Arabidopsis thaliana

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27 September 2018

Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes

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27 September 2018

AtATM is essential for meiosis and the somatic response to DNA damage in plants

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27 September 2018

Severe developmental defects, hypersensitivity to DNA-damaging agents, and lengthened telomeres in Arabidopsis MRE11 mutants

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27 September 2018

Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

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27 September 2018

Arabidopsis UVH3 gene is a homolog of the Saccharomyces cerevisiae RAD2 and human XPG DNA repair genes.

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27 September 2018

TEL1, a gene involved in controlling telomere length in S. cerevisiae, is homologous to the human ataxia telangiectasia gene.

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27 September 2018

High Precision Quantitative Proteomics Using iTRAQ on an LTQ Orbitrap: A New Mass Spectrometric Method Combining the Benefits of All

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8 December 2018

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

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8 December 2018

Mre11 deficiency in Arabidopsis is associated with chromosomal instability in somatic cells and Spo11-dependent genome fragmentation during meiosis

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12 December 2020

based on heuristic

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Quantitative phosphoproteome profiling of iron-deficient Arabidopsis roots

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12 December 2020

based on heuristic

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ATR and ATM play both distinct and additive roles in response to ionizing radiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/25561503

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Participation of chromatin-remodeling proteins in the repair of ultraviolet-B-damaged DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/25561503

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/MCP.M114.040352

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

ResearchGate publication ID

0 references

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