CHEMDNER: The drugs and chemical names extraction challenge (Q35092868)

6 August 2017

CHEMDNER: The drugs and chemical names extraction challenge (English)

1 reference

6 August 2017

0 references

0 references

0 references

6

1 reference

6 August 2017

Obdulia Rabal

3

0 references

Miguel Vazquez

object named as

Miguel Vazquez

series ordinal

4

0 references

Martin Krallinger

series ordinal

1

object named as

Martin Krallinger

1 reference

6 August 2017

Florian Leitner

2

1 reference

PubMed ID

25810766

6 August 2017

Julen Oyarzabal

series ordinal

5

1 reference

6 August 2017

19 January 2015

1 reference

Journal of Cheminformatics

6 August 2017

1 reference

6 August 2017

7

1 reference

6 August 2017

Suppl 1 Text mining for chemistry and the CHEMDNER trac

1 reference

6 August 2017

S1

1 reference

Creative Commons Attribution 4.0 International

6 August 2017

start time

19 January 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/1758-2946-7-s1-s1

0 references

cites work

Incorporating domain knowledge in chemical and biomedical named entity recognition with word representations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

A comparison of conditional random fields and structured support vector machines for chemical entity recognition in biomedical literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

A document processing pipeline for annotating chemical entities in scientific documents

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

LeadMine: a grammar and dictionary driven approach to entity recognition

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

CHEMDNER system with mixed conditional random fields and multi-scale word clustering

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

tmChem: a high performance approach for chemical named entity recognition and normalization

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

The CHEMDNER corpus of chemicals and drugs and its annotation principles

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Improving chemical entity recognition through h-index based semantic similarity

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Chemical entity extraction using CRF and an ensemble of extractors

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

A CRF-based system for recognizing chemical entity mentions (CEMs) in biomedical literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Recognition of chemical entities: combining dictionary-based and grammar-based approaches

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

BioCreative-IV virtual issue

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Building an R&D chemical registration system

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Building a biomedical tokenizer using the token lattice design pattern and the adapted Viterbi algorithm

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

An Overview of BioCreative II.5.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

LINNAEUS: a species name identification system for biomedical literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Analysis of biological processes and diseases using text mining approaches

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Extraction of human kinase mutations from literature, databases and genotyping studies

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

MedlineRanker: flexible ranking of biomedical literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Overview of BioCreative II gene normalization

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Overview of BioCreative II gene mention recognition

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Literature mining for the biologist: from information retrieval to biological discovery

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

GENETAG: a tagged corpus for gene/protein named entity recognition

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

BioCreAtIvE task 1A: gene mention finding evaluation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

CheNER: a tool for the identification of chemical entities and their classes in biomedical literature.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

What makes a gene name? Named entity recognition in the biomedical literature.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331685

Text Mining for Drugs and Chemical Compounds: Methods, Tools and Applications

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25810766

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1758-2946-7-S1-S1

1 reference

journals/jcheminf/KrallingerLRVOV15

6 August 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

6 August 2017

1 reference

PubMed ID

25810766