RNA-Seq transcriptome profiling of upland cotton (Gossypium hirsutum L.) root tissue under water-deficit stress (Q35064265)

6 August 2017

RNA-Seq transcriptome profiling of upland cotton (Gossypium hirsutum L.) root tissue under water-deficit stress (English)

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6 August 2017

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7

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6 August 2017

Megan J Bowman

1

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Philip J Bauer

object named as

Philip J Bauer

3

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author name string

Wonkeun Park

2

1 reference

6 August 2017

Joshua A Udall

4

1 reference

6 August 2017

Justin T Page

5

1 reference

6 August 2017

Joshua Raney

6

1 reference

6 August 2017

Don C Jones

8

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6 August 2017

B Todd Campbell

9

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6 August 2017

language of work or name

English

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publication date

6 December 2013

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6 August 2017

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6 August 2017

8

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6 August 2017

12

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6 August 2017

e82634

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Creative Commons CC0 License

6 August 2017

start time

6 December 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

describes a project that uses

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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8 July 2018

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Genome-wide identification of differentially expressed genes under water deficit stress in upland cotton (Gossypium hirsutum L.).

8 July 2018

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8 July 2018

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Physiological and proteomic responses of cotton (Gossypium herbaceum L.) to drought stress

8 July 2018

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Genome-wide transcriptomic analysis of cotton under drought stress reveal significant down-regulation of genes and pathways involved in fibre elongation and up-regulation of defense responsive genes

8 July 2018

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Comparative analysis of root transcriptome profiles of two pairs of drought-tolerant and susceptible rice near-isogenic lines under different drought stress

8 July 2018

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Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database

8 July 2018

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8 July 2018

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Identification of biotic and abiotic stress up-regulated ESTs in Gossypium arboreum

8 July 2018

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Examining the drought stress transcriptome in cotton leaf and root tissue

8 July 2018

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8 July 2018

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Plant physiology and proteomics reveals the leaf response to drought in alfalfa (Medicago sativa L.).

8 July 2018

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Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.).

8 July 2018

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8 July 2018

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Redox regulation of water stress responses in field-grown plants. Role of hydrogen peroxide and ascorbate

8 July 2018

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Comparative transcriptome analysis of differentially expressed genes in foxtail millet (Setaria italica L.) during dehydration stress

8 July 2018

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Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

8 July 2018

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8 July 2018

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8 July 2018

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Analysis of gene expression in response to water deficit of chickpea (Cicer arietinum L.) varieties differing in drought tolerance

8 July 2018

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Analysis of gene expression and physiological responses in three Mexican maize landraces under drought stress and recovery irrigation

8 July 2018

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Construction and analysis of cotton (Gossypium arboreum L.) drought-related cDNA library

8 July 2018

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Transcript length bias in RNA-seq data confounds systems biology

8 July 2018

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8 July 2018

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Identification of drought-responsive genes in roots of upland rice (Oryza sativa L)

8 July 2018

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Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell

8 July 2018

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8 July 2018

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8 July 2018

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Evolution of duplicate gene expression in polyploid and hybrid plants

8 July 2018

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Gene networks involved in drought stress response and tolerance

8 July 2018

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Identification of drought tolerance determinants by genetic analysis of root response to drought stress and abscisic Acid.

8 July 2018

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8 July 2018

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8 July 2018

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Intrinsic and environmental response pathways that regulate root system architecture

8 July 2018

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8 July 2018

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Osmotic regulation of root system architecture

8 July 2018

1 reference

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Polyploidy and genome evolution in plants

8 July 2018

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The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

An expression analysis of a gene family encoding plasma membrane aquaporins in response to abiotic stresses in Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Hydrotropism interacts with gravitropism by degrading amyloplasts in seedling roots of Arabidopsis and radish

8 July 2018

1 reference

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Understanding mechanisms of novel gene expression in polyploids

8 July 2018

1 reference

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Identification of water-deficit responsive genes in maritime pine (Pinus pinaster Ait.) roots

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Molecular Responses to Water Deficit

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Molecular and physiological approaches to maize improvement for drought tolerance

8 July 2018

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A new mathematical model for relative quantification in real-time RT-PCR

8 July 2018

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Aquaporins: water channel proteins of plant and animal cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.

8 July 2018

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Food: An underground revolution

27 September 2018

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Hydrotropism Interacts with Gravitropism by Degrading Amyloplasts in Seedling Roots of Arabidopsis and Radish

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Rate variation among nuclear genes and the age of polyploidy in Gossypium.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Salt Stress Perception and Plant Growth Regulators in the Halophyte Mesembryanthemum crystallinum.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Overexpression of beta-carotene hydroxylase enhances stress tolerance in Arabidopsis.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Photosynthetic carbon assimilation and associated metabolism in relation to water deficits in higher plants.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.).

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855774

Stomatal response of cotton to water stress and abscisic Acid as affected by water stress history

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24324815

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A comparative transcriptomic study of an allotetraploid and its diploid progenitors illustrates the unique advantages and challenges of RNA-seq in plant species

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24324815

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0082634

1 reference

6 August 2017

0 references

1 reference

6 August 2017

1 reference