Concerted action of the ubiquitin-fusion degradation protein 1 (Ufd1) and Sumo-targeted ubiquitin ligases (STUbLs) in the DNA-damage response (Q35050661)

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English	Concerted action of the ubiquitin-fusion degradation protein 1 (Ufd1) and Sumo-targeted ubiquitin ligases (STUbLs) in the DNA-damage response	scientific article

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scholarly article

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Europe PubMed Central

6 August 2017

Concerted action of the ubiquitin-fusion degradation protein 1 (Ufd1) and Sumo-targeted ubiquitin ligases (STUbLs) in the DNA-damage response (English)

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Europe PubMed Central

6 August 2017

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Geneviève Thon

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24265825%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

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Julie Bonne Køhler

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8 June 2020

Maria Louise Mønster Jørgensen

2

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8 June 2020

Gabriele Beinoraité

3

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8 June 2020

Michael Thorsen

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12 November 2013

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6 August 2017

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8 June 2020

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8 June 2020

e80442

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8 June 2020

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Creative Commons Attribution 4.0 International

12 November 2013

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April 2022 Public Data File from Crossref

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The proteasome factor Bag101 binds to Rad22 and suppresses homologous recombination

1 reference

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8 July 2018

Role of Cdc48/p97 as a SUMO-targeted segregase curbing Rad51-Rad52 interaction

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8 July 2018

Protein group modification and synergy in the SUMO pathway as exemplified in DNA repair

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8 July 2018

Growing sphere of influence: Cdc48/p97 orchestrates ubiquitin-dependent extraction from chromatin

1 reference

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8 July 2018

Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

SUMO-targeted ubiquitin E3 ligase RNF4 is required for the response of human cells to DNA damage

1 reference

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8 July 2018

RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair

1 reference

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8 July 2018

DNA damage-inducible SUMOylation of HERC2 promotes RNF8 binding via a novel SUMO-binding Zinc finger

1 reference

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8 July 2018

Competition, collaboration and coordination--determining how cells bypass DNA damage.

1 reference

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8 July 2018

Ubiquitin and SUMO in DNA repair at a glance

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8 July 2018

Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system

1 reference

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8 July 2018

The AAA-ATPase VCP/p97 promotes 53BP1 recruitment by removing L3MBTL1 from DNA double-strand breaks

1 reference

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8 July 2018

The ubiquitin-selective segregase VCP/p97 orchestrates the response to DNA double-strand breaks.

1 reference

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8 July 2018

CDC-48/p97 coordinates CDT-1 degradation with GINS chromatin dissociation to ensure faithful DNA replication

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8 July 2018

A genome-wide screen identifies p97 as an essential regulator of DNA damage-dependent CDT1 destruction.

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8 July 2018

The Cdc48 machine in endoplasmic reticulum associated protein degradation

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8 July 2018

Cdc48: a power machine in protein degradation

1 reference

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8 July 2018

The ubiquitin- and SUMO-dependent signaling response to DNA double-strand breaks

1 reference

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8 July 2018

DNA Repair and Global Sumoylation Are Regulated by Distinct Ubc9 Noncovalent Complexes

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8 July 2018

Cdc48/p97 mediates UV-dependent turnover of RNA Pol II.

1 reference

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8 July 2018

The SUMO pathway: emerging mechanisms that shape specificity, conjugation and recognition

1 reference

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8 July 2018

Regulation of DNA repair through deSUMOylation and SUMOylation of replication protein A complex.

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8 July 2018

Mechanisms, regulation and consequences of protein SUMOylation

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8 July 2018

Rad52 SUMOylation affects the efficiency of the DNA repair

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8 July 2018

Hydroxyurea-stalled replication forks become progressively inactivated and require two different RAD51-mediated pathways for restart and repair.

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8 July 2018

Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA double-strand breaks

1 reference

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8 July 2018

The SUMO modification pathway is involved in the BRCA1 response to genotoxic stress.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Origin and function of ubiquitin-like proteins

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The SUMO-targeted ubiquitin ligase subunit Slx5 resides in nuclear foci and at sites of DNA breaks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The ubiquitin-selective chaperone CDC-48/p97, a new player in DNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

UBXD7 binds multiple ubiquitin ligases and implicates p97 in HIF1alpha turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Cell cycle progression requires the CDC-48UFD-1/NPL-4 complex for efficient DNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

UBX domain proteins: major regulators of the AAA ATPase Cdc48/p97

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8 July 2018

RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The role of Schizosaccharomyces pombe SUMO ligases in genome stability.

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8 July 2018

RNF8 ubiquitylates histones at DNA double-strand breaks and promotes assembly of repair proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The yeast Hex3.Slx8 heterodimer is a ubiquitin ligase stimulated by substrate sumoylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

SUMO-targeted ubiquitin ligases in genome stability.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins

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8 July 2018

Ubiquitin-dependent proteolytic control of SUMO conjugates

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8 July 2018

The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination

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8 July 2018

Role of SUMO in the dynamics of telomere maintenance in fission yeast

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8 July 2018

Ubc9- and mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks

1 reference

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8 July 2018

Control of Rad52 recombination activity by double-strand break-induced SUMO modification

1 reference

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8 July 2018

ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe

1 reference

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8 July 2018

Postreplication repair and PCNA modification in Schizosaccharomyces pombe

1 reference

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8 July 2018

Chromosome alignment and segregation regulated by ubiquitination of survivin

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Ufd1 exhibits the AAA-ATPase fold with two distinct ubiquitin interaction sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Temporal separation of replication and recombination requires the intra-S checkpoint.

1 reference

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8 July 2018

Nse2, a component of the Smc5-6 complex, is a SUMO ligase required for the response to DNA damage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Defining the SUMO-modified proteome by multiple approaches in Saccharomyces cerevisiae

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8 July 2018

An interactive gene network for securin-separase, condensin, cohesin, Dis1/Mtc1 and histones constructed by mass transformation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Swi1 and Swi3 are components of a replication fork protection complex in fission yeast.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Role of the fission yeast SUMO E3 ligase Pli1p in centromere and telomere maintenance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Rad18 guides poleta to replication stalling sites through physical interaction and PCNA monoubiquitination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Global analysis of protein sumoylation in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Interaction of human DNA polymerase eta with monoubiquitinated PCNA: a possible mechanism for the polymerase switch in response to DNA damage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Q-Gene: processing quantitative real-time RT-PCR data

1 reference

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8 July 2018

Whole-genome microarrays of fission yeast: characteristics, accuracy, reproducibility, and processing of array data

1 reference

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8 July 2018

Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Investigation of the stability of yeast rad52 mutant proteins uncovers post-translational and transcriptional regulation of Rad52p

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Structural and functional conservation of error-free DNA postreplication repair in Schizosaccharomyces pombe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

The fission yeast ubiquitin-conjugating enzymes UbcP3, Ubc15, and Rhp6 affect transcriptional silencing of the mating-type region.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Expression-state boundaries in the mating-type region of fission yeast.

1 reference

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8 July 2018

Modification of the human thymine-DNA glycosylase by ubiquitin-like proteins facilitates enzymatic turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

SUMO modification of Rad22, the Schizosaccharomyces pombe homologue of the recombination protein Rad52.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

Characterization of homologous recombination induced by replication inhibition in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3827193

8 July 2018

A complex of mammalian ufd1 and npl4 links the AAA-ATPase, p97, to ubiquitin and nuclear transport pathways

1 reference

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8 July 2018

Characterization of a fission yeast SUMO-1 homologue, pmt3p, required for multiple nuclear events, including the control of telomere length and chromosome segregation

1 reference

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8 July 2018

Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast

1 reference

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8 July 2018

Cold-sensitive cell-division-cycle mutants of yeast: isolation, properties, and pseudoreversion studies

1 reference

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8 July 2018

In vitro DNA binding activity of Fos/Jun and BZLF1 but not C/EBP is affected by redox changes

1 reference

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8 July 2018

Accumulation of sumoylated Rad52 in checkpoint mutants perturbed in DNA replication

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Fission yeast Rnf4 homologs are required for DNA repair.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

A SUMO-interacting motif activates budding yeast ubiquitin ligase Rad18 towards SUMO-modified PCNA.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

p97/VCP- and Lys48-linked polyubiquitination form a new signaling pathway in DNA damage response.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Distinct AAA-ATPase p97 complexes function in discrete steps of nuclear assembly.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

The AAA ATPase p97/VCP interacts with its alternative co-factors, Ufd1-Npl4 and p47, through a common bipartite binding mechanism

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Cordycepin in Schizosaccharomyces pombe: effects on the wild type and phenotypes of mutants resistant to the drug

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stresses

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

New drug-resistant cassettes for gene disruption and epitope tagging in Schizosaccharomyces pombe.

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Sap1 promotes the association of the replication fork protection complex with chromatin and is involved in the replication checkpoint in Schizosaccharomyces pombe

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Global Map of SUMO Function Revealed by Protein-Protein Interaction and Genetic Networks

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatin

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

SUMOylation regulates Rad18-mediated template switch

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0080442

21 January 2018

Rad22 protein, a rad52 homologue in Schizosaccharomyces pombe, binds to DNA double-strand breaks

1 reference

https://pubmed.ncbi.nlm.nih.gov/24265825

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The topoisomerase I poison camptothecin generates a Chk1-dependent DNA damage checkpoint signal in fission yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/24265825

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A series of ubiquitin binding factors connects CDC48/p97 to substrate multiubiquitylation and proteasomal targeting

1 reference

https://pubmed.ncbi.nlm.nih.gov/24265825

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0080442

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24265825%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

2013PLoSO...880442K

0 references

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24265825%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24265825%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

ResearchGate publication ID

0 references

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