Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845). (Q35037229)

5 August 2017

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845). (English)

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5 August 2017

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Alla Lapidus

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Evelyne-Marie Brambilla

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Evelyne-Marie Brambilla

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Hans-Peter Klenk

34

Hans-Peter Klenk

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Philip Hugenholtz

33

Philip Hugenholtz

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Tanja Woyke

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Tanja Woyke

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Sam Pitluck

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Sam Pitluck

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5 August 2017

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Victor Markowitz

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Amrita Pati

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Jan-Fang Cheng

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Cliff Han

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PubMed ID

21677851

5 August 2017

Konstantinos Mavromatis

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Konstantinos Mavromatis

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5 August 2017

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Lynne Goodwin

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Natalia Mikhailova

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Loren Hauser

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Krishna Palaniappan

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Matt Nolan

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Amy Chen

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Susan Lucas

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Cynthia D Jeffries

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John C Detter

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Markus Göker

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Manfred Rohde

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Nancy Hammon

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Ioanna Pagani

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Shweta Deshpande

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Roxane Tapia

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Monica Misra

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Konstantinos Liolios

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Sabine Gronow

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James Bristow

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5 August 2017

Megan Lu

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5 August 2017

1 April 2011

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Standards in genomic sciences

5 August 2017

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5 August 2017

144-153

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5 August 2017

2

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The DNA bank network: the start from a german initiative

5 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Isolation and characterization of atypical Riemerella columbina strains from pigeons and their differentiation from Riemerella anatipestifer.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

En route to a genome-based classification of Archaea and Bacteria?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Characterization of biofilm formation by Riemerella anatipestifer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Prodigal: prokaryotic gene recognition and translation initiation site identification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

IMG ER: a system for microbial genome annotation expert review and curation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

A rapid bootstrap algorithm for the RAxML Web servers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

The minimum information about a genome sequence (MIGS) specification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Multiple sequence alignment using partial order graphs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Gene ontology: tool for the unification of biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Riemerella anatipestifer gen. nov., comb. nov., the causative agent of septicemia anserum exsudativa, and its phylogenetic affiliation within the Flavobacterium-Cytophaga rRNA homology group

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

How many bootstrap replicates are necessary?

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Immunogenicity of Riemerella anatipestifer broth culture bacterin and cell-free culture filtrate in ducks

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

The effect of route of inoculation and challenge dosage on Riemerella anatipestifer infection in Pekin ducks (Anas platyrhynchos).

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Phylogenetic Position of Riemerella anatipestifer Based on 16S rRNA Gene Sequences

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

[On the taxonomy of Actinobacillus, Haemophilus, and Pasteurella: DNA base composition, respiratory quinones, and biochemical reactions of representative collection cultures (author's transl)]

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB: List No. 40

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3111989

Detection of acid production from carbohydrates by Riemerella anatipestifer and related organisms using the buffered single substrate test

25 October 2018

1 reference

12 December 2020

Studies on the prevalence of Riemerella anatipestifer in the upper respiratory tract of clinically healthy ducklings and characterization of untypable strains

1 reference

12 December 2020

A strain of Moraxella anatipestifer (Pfeifferella anatipestifer) isolated from ducks

1 reference

12 December 2020

Phenotypic and genetic relationships of so-called Moraxella (Pasteurella) anatipestifer to the Flavobacterium/Cytophaga group

1 reference

12 December 2020

Identifiers

PMCID

3111989

1 reference

5 August 2017

1 reference

PubMed ID

21677851