MAGIIC-PRO: detecting functional signatures by efficient discovery of long patterns in protein sequences (Q34974234)

5 August 2017

MAGIIC-PRO: detecting functional signatures by efficient discovery of long patterns in protein sequences (English)

1 reference

5 August 2017

Chien-Yu Chen

2

0 references

author name string

Chen-Ming Hsu

series ordinal

1

1 reference

PubMed ID

16845025

5 August 2017

Baw-Jhiune Liu

series ordinal

3

1 reference

PubMed ID

16845025

5 August 2017

language of work or name

English

0 references

publication date

1 July 2006

1 reference

5 August 2017

Nucleic Acids Research

1 reference

5 August 2017

34

1 reference

5 August 2017

Web Server issue

1 reference

5 August 2017

W356-61

1 reference

5 August 2017

The PROSITE database.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

PRISM: protein interactions by structural matching

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

SCANMOT: searching for similar sequences using a simultaneous scan of multiple sequence motifs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

QuasiMotiFinder: protein annotation by searching for evolutionarily conserved motif-like patterns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

eBLOCKs: enumerating conserved protein blocks to achieve maximal sensitivity and specificity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Greedy mixture learning for multiple motif discovery in biological sequences.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Efficient discovery of conserved patterns using a pattern graph.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Discovering active motifs in sets of related protein sequences and using them for classification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Detecting patterns in protein sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Hot regions in protein--protein interactions: the organization and contribution of structurally conserved hot spot residues

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

SPLASH: structural pattern localization analysis by sequential histograms.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Approaches to the automatic discovery of patterns in biosequences.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Identification of sequence motifs from a set of proteins with related function.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538832

Construction of a dictionary of sequence motifs that characterize groups of related proteins

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845025

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mining protein sequences for motifs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845025

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKL309

1 reference

5 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

5 August 2017

1 reference

PubMed ID

16845025