TreeDet: a web server to explore sequence space (Q34974111)

5 August 2017

TreeDet: a web server to explore sequence space (English)

1 reference

5 August 2017

1 reference

7

1 reference

5 August 2017

Antonio del Sol

6

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Ana M Rojas

object named as

Ana M Rojas

8

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Michael L Tress

object named as

Michael Tress

2

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author name string

Angel Carro

1

1 reference

5 August 2017

David de Juan

3

1 reference

5 August 2017

Florencio Pazos

4

1 reference

5 August 2017

Pedro Lopez-Romero

5

1 reference

5 August 2017

language of work or name

English

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publication date

1 July 2006

1 reference

5 August 2017

Nucleic Acids Research

1 reference

5 August 2017

34

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5 August 2017

W110-5

1 reference

5 August 2017

Web Server issue

1 reference

SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins.

5 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

A family of evolution-entropy hybrid methods for ranking protein residues by importance.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Identification of amino acid residues crucial for chemokine receptor dimerization.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Accurate and scalable identification of functional sites by evolutionary tracing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

An evolutionary trace method defines binding surfaces common to protein families

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Distinct structural elements of rab5 define its functional specificity.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

A method to predict functional residues in proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

SQUARE--determining reliable regions in sequence alignments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Analysis and prediction of functional sub-types from protein sequence alignments.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Residual colours: a proposal for aminochromography.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538789

Automatic methods for predicting functionally important residues

9 December 2018

1 reference

12 December 2020

Sequence analysis reveals how G protein-coupled receptors transduce the signal to the G protein

1 reference

12 December 2020

Effector recognition by the small GTP-binding proteins Ras and Ral

1 reference

12 December 2020

Structural clusters of evolutionary trace residues are statistically significant and common in proteins

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKL203

1 reference

journals/nar/CarroTJPLSVR06

5 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

5 August 2017

1 reference