Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes. (Q34973941)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

title

Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

1

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28 December 2019

Hiroyuki Imachi

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

author name string

Akiyoshi Ohashi

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

Hideki Harada

series ordinal

4

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28 December 2019

language of work or name

English

0 references

publication date

1 August 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

Applied and Environmental Microbiology

28 December 2019

published in

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28 December 2019

volume

72

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28 December 2019

issue

8

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28 December 2019

page(s)

5311-5317

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides.

28 December 2019

cites work

1 reference

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RAKE and LNA-ISH reveal microRNA expression and localization in archival human brain

8 July 2018

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Dramatically improved RNA in situ hybridization signals using LNA-modified probes

8 July 2018

1 reference

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The influence of locked nucleic acid residues on the thermodynamic properties of 2'-O-methyl RNA/RNA heteroduplexes

8 July 2018

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MicroRNA expression in zebrafish embryonic development

8 July 2018

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Mechanistic approach to the problem of hybridization efficiency in fluorescent in situ hybridization.

8 July 2018

1 reference

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Application of locked nucleic acids to improve aptamer in vivo stability and targeting function

8 July 2018

1 reference

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LNA (locked nucleic acid): high-affinity targeting of complementary RNA and DNA.

8 July 2018

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LNA-modified oligonucleotides are highly efficient as FISH probes.

8 July 2018

1 reference

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FISHing with locked nucleic acids (LNA): evaluation of different LNA/DNA mixmers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Is the in situ accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled oligonucleotide probes predicted by a three-dimensional structure model of the 30S ribosomal subunit?

8 July 2018

1 reference

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OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling

8 July 2018

1 reference

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In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

LNA: a versatile tool for therapeutics and genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Single nucleotide polymorphism genotyping using locked nucleic acid (LNA).

8 July 2018

1 reference

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LNA-enhanced detection of single nucleotide polymorphisms in the apolipoprotein E.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Locked nucleic acid (LNA) recognition of RNA: NMR solution structures of LNA:RNA hybrids

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Design of antisense oligonucleotides stabilized by locked nucleic acids

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

In situ detection, isolation, and physiological properties of a thin filamentous microorganism abundant in methanogenic granular sludges: a novel isolate affiliated with a clone cluster, the green non-sulfur bacteria, subdivision I.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

The identification of microorganisms by fluorescence in situ hybridisation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Structural studies of LNA:RNA duplexes by NMR: conformations and implications for RNase H activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Fluorescence In situ hybridization assay using peptide nucleic acid probes for differentiation between tuberculous and nontuberculous mycobacterium species in smears of mycobacterium cultures

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Advantages of 2'-O-methyl oligoribonucleotide probes for detecting RNA targets

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

PNA hybridizes to complementary oligonucleotides obeying the Watson-Crick hydrogen-bonding rules

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Sequence-dependent thermodynamic parameters for locked nucleic acid (LNA)-DNA duplex formation

8 July 2018

1 reference

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RNA interference in mammalian cells by chemically-modified RNA.

26 October 2018

1 reference

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Identification of indicator microorganisms using a standardized PNA FISH method.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538721

Enhanced allele-specific PCR discrimination in SNP genotyping using 3' locked nucleic acid (LNA) primers

26 October 2018

1 reference

12 December 2020

Genotyping of the apolipoprotein B R3500Q mutation using immobilized locked nucleic acid capture probes

1 reference

12 December 2020

In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes

1 reference

12 December 2020

An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments

1 reference

12 December 2020

The conformations of locked nucleic acids (LNA)

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.03039-05

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16885281%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

PubMed publication ID

16885281

1 reference