A novel uracil-DNA glycosylase family related to the helix-hairpin-helix DNA glycosylase superfamily (Q34966906)

5 August 2017

title

A novel uracil-DNA glycosylase family related to the helix-hairpin-helix DNA glycosylase superfamily (English)

1 reference

5 August 2017

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Ji Hyung Chung

1

1 reference

5 August 2017

Eun Kyoung Im

2

1 reference

5 August 2017

Hyun-Young Park

3

1 reference

5 August 2017

Jun Hye Kwon

4

1 reference

5 August 2017

Seahyoung Lee

5

1 reference

5 August 2017

Jaewon Oh

6

1 reference

5 August 2017

Ki-Chul Hwang

7

1 reference

5 August 2017

Jong Ho Lee

8

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5 August 2017

Yangsoo Jang

9

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5 August 2017

language of work or name

English

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publication date

1 April 2003

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5 August 2017

published in

Nucleic Acids Research

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5 August 2017

volume

31

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5 August 2017

issue

8

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5 August 2017

page(s)

2045-2055

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A novel uracil-DNA glycosylase with broad substrate specificity and an unusual active site

5 August 2017

cites work

1 reference

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A novel type of uracil-DNA glycosylase mediating repair of hydrolytic DNA damage in the extremely thermophilic eubacterium Thermus thermophilus

8 July 2018

1 reference

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Repair of oxidative DNA damage: mechanisms and functions

8 July 2018

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An iron-sulfur cluster in the family 4 uracil-DNA glycosylases

8 July 2018

1 reference

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Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases

8 July 2018

1 reference

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DNA substrates containing defined oxidative base lesions and their application to study substrate specificities of base excision repair enzymes

8 July 2018

1 reference

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Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

The alpha/beta fold uracil DNA glycosylases: a common origin with diverse fates

8 July 2018

1 reference

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Lessons learned from structural results on uracil-DNA glycosylase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Structure and function in the uracil-DNA glycosylase superfamily

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Characterization of a thermostable DNA glycosylase specific for U/G and T/G mismatches from the hyperthermophilic archaeon Pyrobaculum aerophilum.

8 July 2018

1 reference

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Thermostable uracil-DNA glycosylase from Thermotoga maritima a member of a novel class of DNA repair enzymes

8 July 2018

1 reference

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Protein mimicry of DNA from crystal structures of the uracil-DNA glycosylase inhibitor protein and its complex with Escherichia coli uracil-DNA glycosylase

8 July 2018

1 reference

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Identification of a new uracil-DNA glycosylase family by expression cloning using synthetic inhibitors

8 July 2018

1 reference

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The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

8 July 2018

1 reference

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DNA glycosylases in the base excision repair of DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

8 July 2018

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TreeView: an application to display phylogenetic trees on personal computers

8 July 2018

1 reference

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Counteracting the mutagenic effect of hydrolytic deamination of DNA 5-methylcytosine residues at high temperature: DNA mismatch N-glycosylase Mig.Mth of the thermophilic archaeon Methanobacterium thermoautotrophicum THF

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

A new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

8 July 2018

1 reference

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Instability and decay of the primary structure of DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

The purification of a mismatch-specific thymine-DNA glycosylase from HeLa cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Nuclear and mitochondrial forms of human uracil-DNA glycosylase are encoded by the same gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

The structural basis of specific base-excision repair by uracil-DNA glycosylase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

An N -Glycosidase from Escherichia coli That Releases Free Uracil from DNA Containing Deaminated Cytosine Residues

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Molecular cloning and primary structure of the uracil-DNA-glycosylase gene from Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Basic local alignment search tool

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

MutM, a protein that prevents G C→T A transversions, is formamidopyrimidine-DNA glycosylase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Base-specific reactions useful for DNA sequencing: methylene blue – sensitized photooxidation of guanine and osmium tetraoxide modification of thymine

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Excision of uracil from DNA by the hyperthermophilic Afung protein is dependent on the opposite base and stimulated by heat-induced transition to a more open structure.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=153747

Uracil-DNA glycosylase activities in hyperthermophilic micro-organisms

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12682355

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Heat-induced deamination of cytosine residues in deoxyribonucleic acid

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12682355

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG319

1 reference

5 August 2017

1 reference

5 August 2017

1 reference