Method of predicting splice sites based on signal interactions (Q34898816)

5 August 2017

Method of predicting splice sites based on signal interactions (English)

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5 August 2017

Igor B Rogozin

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author name string

Alexander Churbanov

series ordinal

1

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5 August 2017

Jitender S Deogun

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3

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5 August 2017

Hesham Ali

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4

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5 August 2017

3 April 2006

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5 August 2017

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5 August 2017

1

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5 August 2017

10

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https://scigraph.springernature.com/pub.10.1186/1745-6150-1-10

5 August 2017

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Computer methods to locate signals in nucleic acid sequences

8 July 2018

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Prediction of splice junctions in mRNA sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Application of learning techniques to splicing site recognition.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

8 July 2018

1 reference

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An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

New analytical tool for analysis of splice site sequence determinants.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Statistical analysis of mammalian pre-mRNA splicing sites.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Neural network detects errors in the assignment of mRNA splice sites

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Prediction of human mRNA donor and acceptor sites from the DNA sequence.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Prediction of gene structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Analysis of context of 5'-splice site sequences in mammalian mRNA precursors by subclass method

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

A new approach for gene annotation using unambiguous sequence joining.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

MISAE: a new approach for regulatory motif extraction.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Prediction of splice sites with dependency graphs and their expanded bayesian networks.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Logos: a modular bayesian model for de novo motif detection.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Modeling splicing sites with pairwise correlations.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Modeling splice sites with Bayes networks.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

A weight array method for splicing signal analysis.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1526722

Syntactic pattern analysis of 5'-splice site sequences of mRNA precursors in higher eukaryote genes

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16584568

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Recognition patterns for exon-intron junctions in higher organisms as revealed by a computer search

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16584568

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Human pre-mRNA splicing signals

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16584568

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1745-6150-1-10

1 reference

Dimensions Publication ID

5 August 2017

0 references

1 reference

5 August 2017

1 reference