Bioinformatics for the genomic sciences and towards systems biology. Japanese activities in the post-genome era. (Q34858053)

4 August 2017

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title

Bioinformatics for the genomic sciences and towards systems biology. Japanese activities in the post-genome era. (English)

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4 August 2017

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Toru Yao

1

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4 August 2017

1 July 2002

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Progress in Biophysics and Molecular Biology

4 August 2017

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4 August 2017

80

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4 August 2017

1-2

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4 August 2017

23-42

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Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking.

4 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Conserved domains in DNA repair proteins and evolution of repair systems

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Rational drug discovery revisited: interfacing experimental programs with bio- and chemo-informatics

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A surprising simplicity to protein folding.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Protein structure prediction and structural genomics

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

An automated comparative analysis of 17 complete microbial genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Gene expression informatics--it's all in your mine.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Knowledge-based prediction of protein structures and the design of novel molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

FANTOM DB: database of Functional Annotation of RIKEN Mouse cDNA Clones.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

READ: RIKEN Expression Array Database.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Target selection for structural genomics

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

High-efficiency full-length cDNA cloning

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Metabolic modeling of microbial strains in silico.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Japan opens access to mouse cDNA data...and to report on strengths and weaknesses of genomics centre.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Japan's ape sequencing effort set to unravel the brain's secrets.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A genomic regulatory network for development

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Computational identification of promoters and first exons in the human genome

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

1 reference

7 January 2021

Drug discovery: a historical perspective

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Modelling cellular behaviour

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Construction and analysis of a human-chimpanzee comparative clone map.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniae

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Personalized medicine: revolutionizing drug discovery and patient care

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Comparative model-building of the mammalian serine proteases

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

An assessment of gene prediction accuracy in large DNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

The DNA sequence of human chromosome 21

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A Comparison of the Celera and Ensembl Predicted Gene Sets Reveals Little Overlap in Novel Genes

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Global transposon mutagenesis and a minimal Mycoplasma genome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Initial sequencing and analysis of the human genome

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A physical map of the human genome

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A new approach to protein fold recognition

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Protein structure prediction in the postgenomic era.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Pathway databases: a case study in computational symbolic theories

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Cell-free production and stable-isotope labeling of milligram quantities of proteins

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Tandem clusters of membrane proteins in complete genome sequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

TOUCHSTONE: an ab initio protein structure prediction method that uses threading-based tertiary restraints.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Systems biology: a brief overview

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Embryogenomics: developmental biology meets genomics

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Computational analysis of full-length mouse cDNAs compared with human genome sequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

The emerging paradigm and open problems in comparative genomics.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Comparing function and structure between entire proteomes

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Progress in protein structure prediction

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Superconductivity spurs Japanese plan for NMR research

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

1 reference

7 January 2021

Modeling the heart--from genes to cells to the whole organ

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

The promise of comparative genomics in mammals

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Identification and analysis of eukaryotic promoters: recent computational approaches

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

From protein structure to function.

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

HOBACGEN: database system for comparative genomics in bacteria

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

The complexity of simplicity

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Identifying regulatory networks by combinatorial analysis of promoter elements

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Viva la revolution! A report from the FANTOM Meeting

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

ModBase: a database of comparative protein structure models.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Impact of human genome sequencing for in silico target discovery

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Gene expression physiology and pathophysiology of the immune system

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Global Efforts in Structural Genomics

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Gene-finding approaches for eukaryotes

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Exploring complex networks

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Protein-protein interaction panel using mouse full-length cDNAs

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Japanese plans to sequence human genome

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A genomic perspective on protein families

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Functional annotation of a full-length mouse cDNA collection

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Whole-cell simulation: a grand challenge of the 21st century

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

The Sequence of the Human Genome

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Completeness in structural genomics.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Biochemical systems analysis of genome-wide expression data

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Automated high-speed DNA sequencing

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Bioinformatics--the necessity of the quest for 'first principles' in life

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https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Insights into protein function through large-scale computational analysis of sequence and structure

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

1 reference

7 January 2021

Structural genomics projects in Japan

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

HUNT: launch of a full-length cDNA database from the Helix Research Institute

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

From fold predictions to function predictions: automation of functional site conservation analysis for functional genome predictions

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

Construction of a generalized simulator for multi-cellular organisms and its application to SMAD signal transduction.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2802%2900011-1

7 January 2021

10.1016/S0079-6107(02)00011-1

Identifiers

DOI

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4 August 2017

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PubMed ID

12231221