Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5'-splice site selection. (Q34693499)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5'-splice site selection.	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

Branch-point attack in group II introns is a highly reversible transesterification, providing a potential proofreading mechanism for 5'-splice site selection (English)

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

author name string

K Chin

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

A M Pyle

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

language of work or name

0 references

publication date

1 June 1995

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

4

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

391-406

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

Domain 5 interacts with domain 6 and influences the second transesterification reaction of group II intron self-splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Group I and group II introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Evidence for two active sites in the spliceosome provided by stereochemistry of pre-mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Mutation of the conserved first nucleotide of a group II intron from yeast mitochondrial DNA reduces the rate but allows accurate splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Kinetic analysis of the 5' splice junction hydrolysis of a group II intron promoted by domain 5.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Introns as mobile genetic elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Conversion of a group II intron into a new multiple-turnover ribozyme that selectively cleaves oligonucleotides: elucidation of reaction mechanism and structure/function relationships

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Catalysis of RNA cleavage by a ribozyme derived from the group I intron of Anabaena pre-tRNA(Leu).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

The stereochemical course of group II intron self-splicing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Cloning and expression of the gene for bacteriophage T7 RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Nonenzymatic synthesis of oligoadenylates on a polyuridylic acid template

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

The intervening sequence RNA of Tetrahymena is an enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Group II intron domain 5 facilitates a trans-splicing reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Characterization of RNA hairpin loop stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Mutations at the lariat acceptor site allow self-splicing of a group II intron without lariat formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Reverse self-splicing of the tetrahymena group I intron: implication for the directionality of splicing and for intron transposition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Comparative and functional anatomy of group II catalytic introns—a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Infectious introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Structure-function relationships in a self-splicing group II intron: a large part of domain II of the mitochondrial intron aI5 is not essential for self-splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

DNA and RNA sequence determination based on phosphorothioate chemistry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Efficient trans-splicing of a yeast mitochondrial RNA group II intron implicates a strong 5' exon-intron interaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Excised group II introns in yeast mitochondria are lariats and can be formed by self-splicing in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

The generality of self-splicing RNA: relationship to nuclear mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

On the origin of RNA splicing and introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Integration of group II intron bI1 into a foreign RNA by reversal of the self-splicing reaction in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Catalysis of RNA cleavage by the Tetrahymena thermophila ribozyme. 1. Kinetic description of the reaction of an RNA substrate complementary to the active site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Self-splicing group II and nuclear pre-mRNA introns: how similar are they?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Base-pairing interactions involving the 5' and 3'-terminal nucleotides of group II self-splicing introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Interaction of Escherichia coli tRNA(Ser) with its cognate aminoacyl-tRNA synthetase as determined by footprinting with phosphorothioate-containing tRNA transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Restoration of the self-splicing activity of a defective group II intron by a small trans-acting RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Efficient site-directed mutagenesis using uracil-containing DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Splice site selection and role of the lariat in a group II intron

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Reverse self-splicing of group II intron RNAs in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Group II introns deleted for multiple substructures retain self-splicing activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

A novel base-pairing interaction between U2 and U6 snRNAs suggests a mechanism for the catalytic activation of the spliceosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

Regenerating good sense: RNA editing and trans splicing in plant mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

7 July 2018

A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1482411

26 October 2018

Fate of the junction phosphate in alternating forward and reverse self-splicing reactions of group II intron RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetics of intermolecular cleavage by hammerhead ribozymes

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Building a kinetic framework for group II intron ribozyme activity: quantitation of interdomain binding and reaction rate

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Catalytic site components common to both splicing steps of a group II intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple exon-binding sites in class II self-splicing introns

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Group II intron self-splicing. Alternative reaction conditions yield novel products

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Group II intron self-splicing: development of alternative reaction conditions and identification of a predicted intermediate

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of branched oligonucleotides from RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A self-splicing RNA excises an intron lariat

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Self-splicing of group II introns in vitro: mapping of the branch point and mutational inhibition of lariat formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The self-splicing RNA of Tetrahymena is trapped in a less active conformation by gel purification

1 reference

https://pubmed.ncbi.nlm.nih.gov/7493317

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:7493317%20AND%20SRC:MED&resulttype=core&format=json

19 October 2019

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34693499&oldid=1387525355"