Functional genomics as applied to mapping transcription regulatory networks (Q34679069)

3 August 2017

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title

Functional genomics as applied to mapping transcription regulatory networks (English)

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3 August 2017

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Nila Banerjee

1

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PubMed ID

12057687

3 August 2017

Michael Q Zhang

series ordinal

2

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3 August 2017

1 June 2002

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Current Opinion in Microbiology

3 August 2017

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3 August 2017

5

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3 August 2017

313-317

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3 August 2017

3

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Functional analysis of the yeast genome

3 August 2017

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https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Gene expression data analysis

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https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Computational analysis of microarray data

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https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Cluster analysis and display of genome-wide expression patterns

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Systematic determination of genetic network architecture

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Analysis of gene expression data using self-organizing maps

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

A genome-wide transcriptional analysis of the mitotic cell cycle

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

The transcriptional program of sporulation in budding yeast

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Knowledge-based analysis of microarray gene expression data by using support vector machines

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Coupled two-way clustering analysis of gene microarray data

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Predicting gene regulatory elements in silico on a genomic scale

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Promoter analysis of co-regulated genes in the yeast genome

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Combining frequency and positional information to predict transcription factor binding sites.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Genes regulated cooperatively by one or more transcription factors and their identification in whole eukaryotic genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Regulatory element detection using correlation with expression.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

cis element/transcription factor analysis (cis/TF): a method for discovering transcription factor/cis element relationships

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Functional promoter modules can be detected by formal models independent of overall nucleotide sequence similarity.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Recognition of NFATp/AP-1 composite elements within genes induced upon the activation of immune cells

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Identifying target sites for cooperatively binding factors

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Identifying regulatory networks by combinatorial analysis of promoter elements

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Genome-wide location and function of DNA binding proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Computer-assisted identification of cell cycle-related genes: new targets for E2F transcription factors

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Use of chromatin immunoprecipitation to clone novel E2F target promoters

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Large-scale temporal gene expression mapping of central nervous system development

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Using Bayesian networks to analyze expression data

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Inferring subnetworks from perturbed expression profiles.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Computational studies of gene regulatory networks: in numero molecular biology.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Serial regulation of transcriptional regulators in the yeast cell cycle

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Genome-wide analysis relating expression level with protein subcellular localization

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Computational identification of promoters and first exons in the human genome

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

SCPD: a promoter database of the yeast Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

A genomic regulatory network for development

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2802%2900322-3

7 January 2021

10.1016/S1369-5274(02)00322-3

Identifiers

DOI

1 reference

3 August 2017

1 reference

PubMed ID

12057687