Dissecting long-range transcriptional mechanisms by chromatin immunoprecipitation (Q34675849)

3 August 2017

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title

Dissecting long-range transcriptional mechanisms by chromatin immunoprecipitation (English)

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3 August 2017

Kirby D Johnson

1

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PubMed ID

12054902

3 August 2017

Emery H Bresnick

series ordinal

2

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3 August 2017

1 January 2002

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3 August 2017

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3 August 2017

26

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3 August 2017

27-36

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3 August 2017

1

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Histone acetylation in chromatin structure and transcription

3 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone acetyltransferase complexes and their link to transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone deacetylases: complex transducers of nuclear signals

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Chromatin disruption and modification

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone hyperacetylation does not alter the positioning or stability of phased nucleosomes on the mouse mammary tumor virus long terminal repeat

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Acetylation increases the alpha-helical content of the histone tails of the nucleosome

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

A positive role for histone acetylation in transcription factor access to nucleosomal DNA

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Binding of TATA binding protein to a naturally positioned nucleosome is facilitated by histone acetylation

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Disruption of higher-order folding by core histone acetylation dramatically enhances transcription of nucleosomal arrays by RNA polymerase III

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Structure and ligand of a histone acetyltransferase bromodomain

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Structure and function of a human TAFII250 double bromodomain module

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Role of covalent modifications of histones in regulating gene expression

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

The language of covalent histone modifications

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone methylation versus histone acetylation: new insights into epigenetic regulation

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Developmentally dynamic histone acetylation pattern of a tissue-specific chromatin domain

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Targeted recruitment of histone acetyltransferase activity to a locus control region

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

The murine beta-globin locus control region regulates the rate of transcription but not the hyperacetylation of histones at the active genes

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

1 reference

7 January 2021

Influence of chromatin structure on the binding of transcription factors to DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

What does 'chromatin remodeling' mean?

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

CREB-Binding protein acetylates hematopoietic transcription factor GATA-1 at functionally important sites

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Regulation of E2F1 activity by acetylation

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Contact with a component of the polymerase II holoenzyme suffices for gene activation

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Nuclear RNA polymerases: role of general initiation factors and cofactors in eukaryotic transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Enhancer sequences and the regulation of gene transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Locus control regions: coming of age at a decade plus

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Position-independent, high-level expression of the human beta-globin gene in transgenic mice

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Requirement of an E1A-sensitive coactivator for long-range transactivation by the beta-globin locus control region

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Synergism between hypersensitive sites confers long-range gene activation by the beta-globin locus control region

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

1 reference

7 January 2021

Riding the (mono)rails: the structure of catenated DNA-tracking proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Distant liaisons: long-range enhancer-promoter interactions in Drosophila.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Looping versus linking: toward a model for long-distance gene activation

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Chromatin as an essential part of the transcriptional mechanim

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Developmental regulation of topoisomerase II sites and DNase I-hypersensitive sites in the chicken beta-globin locus

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Patterns of histone acetylation suggest dual pathways for gene activation by a bifunctional locus control region

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Formaldehyde-mediated DNA-protein crosslinking: a probe for in vivo chromatin structures

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

In vivo footprinting of a muscle specific enhancer by ligation mediated PCR.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Ligation-mediated PCR for quantitative in vivo footprinting

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Analysis of chromatin structure by in vivo formaldehyde cross-linking.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Erythroid transcription factor NF-E2 is a haematopoietic-specific basic-leucine zipper protein

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Purification of the human NF-E2 complex: cDNA cloning of the hematopoietic cell-specific subunit and evidence for an associated partner

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Retroviral integration within the Fli-2 locus results in inactivation of the erythroid transcription factor NF-E2 in Friend erythroleukemias: evidence that NF-E2 is essential for globin expression

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Dependence of globin gene expression in mouse erythroleukemia cells on the NF-E2 heterodimer

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Core histone hyperacetylation co-maps with generalized DNase I sensitivity in the chicken beta-globin chromosomal domain.

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Transitions in histone acetylation reveal boundaries of three separately regulated neighboring loci

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone acetylation and globin gene switching

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone acetylation at promoters is differentially affected by specific activators and repressors

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Stopped at the border: boundaries and insulators

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and a downstream promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Distinction between AP1 and NF-E2 factor-binding at specific chromatin regions in mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Cell cycle-dependent recruitment of HDAC-1 correlates with deacetylation of histone H4 on an Rb-E2F target promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Use of chromatin immunoprecipitation to clone novel E2F target promoters

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Bcl-2 and Bax interactions in mitochondria probed with green fluorescent protein and fluorescence resonance energy transfer

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Enhancement of beta-globin locus control region-mediated transactivation by mitogen-activated protein kinases through stochastic and graded mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Allosteric effects of Pit-1 DNA sites on long-term repression in cell type specification

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

Histone acetylation beyond promoters: long-range acetylation patterns in the chromatin world

1 reference

https://api.crossref.org/works/10.1016%2FS1046-2023%2802%2900005-1

7 January 2021

10.1016/S1046-2023(02)00005-1

Identifiers

DOI

1 reference

3 August 2017

1 reference

PubMed ID

12054902