Binding of the 9-O-N-aryl/arylalkyl amino carbonyl methyl substituted berberine analogs to tRNA(phe.). (Q34634102)

3 August 2017

Binding of the 9-O-N-aryl/arylalkyl amino carbonyl methyl substituted berberine analogs to tRNA(phe.). (English)

1 reference

3 August 2017

Anirban Basu

1

1 reference

3 August 2017

Parasuraman Jaisankar

series ordinal

2

1 reference

3 August 2017

Gopinatha Suresh Kumar

series ordinal

3

1 reference

3 August 2017

language of work or name

English

0 references

publication date

19 March 2013

1 reference

3 August 2017

1 reference

3 August 2017

8

1 reference

3 August 2017

e58279

1 reference

3 August 2017

3

1 reference

Creative Commons Attribution 4.0 International

3 August 2017

start time

19 March 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Synthesis and anticancer activity of a novel series of 9-O-substituted berberine derivatives: a lipophilic substitute role

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RNA targeting by small molecules: Binding of protoberberine, benzophenanthridine and aristolochia alkaloids to various RNA structures

7 July 2018

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Biophysical characterization of the strong stabilization of the RNA triplex poly(U)•poly(A)*poly(U) by 9-O-(ω-amino) alkyl ether berberine analogs

7 July 2018

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Targeting RNA by small molecules: comparative structural and thermodynamic aspects of aristololactam-β-D-glucoside and daunomycin binding to tRNA(phe)

7 July 2018

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Synthesis of 9-substituted derivatives of berberine as anti-HIV agents

7 July 2018

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Probing tRNA interaction with biogenic polyamines

7 July 2018

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Isoquinoline alkaloids and their binding with polyadenylic acid: potential basis of therapeutic action

7 July 2018

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Molecular recognition of RNA: challenges for modelling interactions and plasticity

7 July 2018

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A systematic review of the anticancer properties of berberine, a natural product from Chinese herbs

7 July 2018

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Berberine and Coptidis rhizoma as novel antineoplastic agents: a review of traditional use and biomedical investigations

7 July 2018

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Molecular aspects of small molecules-poly(A) interaction: an approach to RNA based drug design

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

9-N-Substituted berberine derivatives: stabilization of G-quadruplex DNA and down-regulation of oncogene c-myc

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Self-structure induction in single stranded poly(A) by small molecules: Studies on DNA intercalators, partial intercalators and groove binding molecules

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Pentamidine binds to tRNA through non-specific hydrophobic interactions and inhibits aminoacylation and translation

7 July 2018

1 reference

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Antimicrobial properties of berberines alkaloids in Coptis chinensis Franch by microcalorimetry.

7 July 2018

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Berberine produces antidepressant-like effects in the forced swim test and in the tail suspension test in mice

7 July 2018

1 reference

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9-Substituted berberine derivatives as G-quadruplex stabilizing ligands in telomeric DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Physical and structural basis for the strong interactions of the -ImPy- central pairing motif in the polyamide f-ImPyIm.

7 July 2018

1 reference

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Towards the discovery of drug-like RNA ligands?

7 July 2018

1 reference

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Synthesis of linked berberine dimers and their remarkably enhanced DNA-binding affinities.

7 July 2018

1 reference

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Influence of the amino substituents in the interaction of ethidium bromide with DNA.

7 July 2018

1 reference

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The functions of animal microRNAs

7 July 2018

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Rapid preparation of RNA samples for NMR spectroscopy and X-ray crystallography

7 July 2018

1 reference

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MicroRNAs: genomics, biogenesis, mechanism, and function

7 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

7 July 2018

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Targeting RNA with small-molecule drugs: therapeutic promise and chemical challenges

21 January 2018

1 reference

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Studies on preventive and curative effects of berberine on chemical-induced hepatotoxicity in rodents.

7 July 2018

1 reference

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Energetics of DNA intercalation reactions

7 July 2018

1 reference

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RNA as a drug target: methods for biophysical characterization and screening

7 July 2018

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Nonsequence-specific DNA recognition: a structural perspective

7 July 2018

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RNA as a drug target: chemical, modelling, and evolutionary tools

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Progress in anti-HIV structure-based drug design

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice.

7 July 2018

1 reference

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Role of the hydrophobic effect in stability of site-specific protein-DNA complexes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3602459

RNA targeting through binding of small molecules: Studies on t-RNA binding by the cytotoxic protoberberine alkaloid coralyne

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

RNA specific molecules: cytotoxic plant alkaloid palmatine binds strongly to poly(A).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Interaction of isoquinoline alkaloids with an RNA triplex: structural and thermodynamic studies of berberine, palmatine, and coralyne binding to poly(U).poly(A)(*)poly(U).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Synthesis and DNA-binding affinities of monomodified berberines

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Spacer length and attaching position-dependent binding of synthesized protoberberine dimers to double-stranded DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Synthesis, DNA-binding affinities, and binding mode of berberine dimers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Interaction of tRNA with antitumor polyamine analogues

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

DNA intercalation of methylene blue and quinacrine: new insights into base and sequence specificity from structural and thermodynamic studies with polynucleotides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

DNA-binding cytotoxic alkaloids: comparative study of the energetics of binding of berberine, palmatine, and coralyne

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Novel approach to Job's method: An undergraduate experiment

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Microcalorimetry of interaction of dihydro-imidazo-phenanthridinium (DIP)-based compounds with duplex DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0058279

Impact of static and dynamic A-form heterogeneity on the determination of RNA global structural dynamics using NMR residual dipolar couplings

21 January 2018

1 reference

12 December 2020

RNA binding small molecules: studies on t-RNA binding by cytotoxic plant alkaloids berberine, palmatine and the comparison to ethidium

1 reference

12 December 2020

Molecular recognition of DNA by small molecules: AT base pair specific intercalative binding of cytotoxic plant alkaloid palmatine

1 reference

12 December 2020

Binding of protoberberine alkaloid coralyne with double stranded poly(A): a biophysical study

1 reference

12 December 2020

Berberine-DNA complexation: new insights into the cooperative binding and energetic aspects

1 reference

12 December 2020

Enhanced DNA binding of 9-ω-amino alkyl ether analogs from the plant alkaloid berberine

1 reference

12 December 2020

Synthesis of novel 9-O-N-aryl/aryl-alkyl amino carbonyl methyl substituted berberine analogs and evaluation of DNA binding aspects

1 reference

12 December 2020

Studies on interaction of anthracycline antibiotics and deoxyribonucleic acid: equilibrium binding studies on interaction of daunomycin with deoxyribonucleic acid

1 reference

12 December 2020

Determination of binding stoichiometry by the continuous variation method: the Job plot

1 reference

12 December 2020

Interaction of berberine chloride with deoxyribonucleic acids: evidence for base and sequence specificity

1 reference

12 December 2020

Interactions of berberine with poly(A) and tRNA

1 reference

12 December 2020

Energetics of drug-DNA interactions

1 reference

12 December 2020

Berberine, a strong polyriboadenylic acid binding plant alkaloid: spectroscopic, viscometric, and thermodynamic study

1 reference

12 December 2020

A thermodynamic signature for drug-DNA binding mode

1 reference

12 December 2020

In vitro antioxidant studies on the benzyl tetra isoquinoline alkaloid berberine

1 reference

12 December 2020

Molecular aspects on the specific interaction of cytotoxic plant alkaloid palmatine to poly(A)

1 reference

12 December 2020

Binding of the anticancer alkaloid sanguinarine with tRNA(phe): spectroscopic and calorimetric studies

1 reference

12 December 2020

The antihypertensive effect of the berberine derivative 6-protoberberine in spontaneously hypertensive rats

1 reference

12 December 2020

Structural and thermodynamic strategies for site-specific DNA binding proteins

1 reference

12 December 2020

The 9-position in berberine analogs is an important determinant of DNA topoisomerase II inhibition

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0058279

Identifiers

DOI

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3 August 2017

0 references

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3 August 2017

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