Intronic and exonic sequences modulate 5' splice site selection in plant nuclei (Q34626582)

3 August 2017

Intronic and exonic sequences modulate 5' splice site selection in plant nuclei (English)

1 reference

3 August 2017

A J McCullough

1

1 reference

PubMed ID

9023120

3 August 2017

M A Schuler

series ordinal

2

1 reference

PubMed ID

9023120

3 August 2017

language of work or name

English

0 references

publication date

1 March 1997

1 reference

3 August 2017

7

1 reference

inferred from page(s)

published in

Nucleic Acids Research

1 reference

3 August 2017

25

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3 August 2017

5

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3 August 2017

1071-1077

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An intron splicing enhancer containing a G-rich repeat facilitates inclusion of a vertebrate micro-exon.

3 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Pre-mRNA splicing in plants: characterization of Ser/Arg splicing factors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

U1 snRNA promotes the selection of nearby 5' splice sites by U6 snRNA in mammalian cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

An intron enhancer recognized by splicing factors activates polyadenylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Conversion of a trans-spliced C. elegans gene into a conventional gene by introduction of a splice donor site.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Functional analysis of a C. elegans trans-splice acceptor

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Factors affecting authentic 5' splice site selection in plant nuclei

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

The cardiac troponin T alternative exon contains a novel purine-rich positive splicing element

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Elements regulating an alternatively spliced exon of the rat fibronectin gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

3' splice site selection in dicot plant nuclei is position dependent

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Mutations in the conserved loop of human U5 snRNA generate use of novel cryptic 5' splice sites in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Pathways for selection of 5' splice sites by U1 snRNPs and SF2/ASF.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

AU-rich intronic elements affect pre-mRNA 5' splice site selection in Drosophila melanogaster

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Regulation of alternative pre-mRNA splicing by a novel repeated hexanucleotide element.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

A subset of SR proteins activates splicing of the cardiac troponin T alternative exon by direct interactions with an exonic enhancer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Identification of a plant serine-arginine-rich protein similar to the mammalian splicing factor SF2/ASF.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

A 32-nucleotide exon-splicing enhancer regulates usage of competing 5' splice sites in a differential internal exon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Regulation of alternative 3' splice site selection by constitutive splicing factors.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

A compensatory base change in U1 snRNA suppresses a 5' splice site mutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Transient expression of heterologous RNAs using tomato golden mosaic virus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

A compensatory base change in human U2 snRNA can suppress a branch site mutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Nuclear pre-mRNA introns: analysis and comparison of intron sequences from Tetrahymena thermophila and other eukaryotes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

The essential pre-mRNA splicing factor SF2 influences 5' splice site selection by activating proximal sites.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Regulation of sex-specific RNA splicing at the Drosophila doublesex gene: cis-acting mutations in exon sequences alter sex-specific RNA splicing patterns

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

In vivo analysis of plant pre-mRNA splicing using an autonomously replicating vector

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Different effects of intron nucleotide composition and secondary structure on pre-mRNA splicing in monocot and dicot plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146543

Mammalian pre-mRNA branch site selection by U2 snRNP involves base pairing.

7 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F25.5.1071

The role of exon sequences in splice site selection.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F25.5.1071

The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F25.5.1071

A repeating 11-mer amino acid motif and plant desiccation

21 January 2018

1 reference

12 December 2020

A splicing enhancer in the human fibronectin alternate ED1 exon interacts with SR proteins and stimulates U2 snRNP binding

1 reference

12 December 2020

General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer

1 reference

12 December 2020

Mutations in yeast U5 snRNA alter the specificity of 5' splice-site cleavage

1 reference

12 December 2020

U5 snRNA interacts with exon sequences at 5′ and 3′ splice sites

1 reference

12 December 2020

Activation of c-src neuron-specific splicing by an unusual RNA element in vivo and in vitro

1 reference

12 December 2020

Expression of maize Adh1 intron mutants in tobacco nuclei

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/25.5.1071

1 reference

3 August 2017

1 reference

3 August 2017

1 reference

PubMed ID

9023120