MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection (Q34598959)

3 August 2017

MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection (English)

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3 August 2017

Richard D Morgan

1

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3 August 2017

Tanya K Bhatia

series ordinal

2

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3 August 2017

Lindsay Lovasco

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3

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3 August 2017

Theodore B Davis

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4

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3 August 2017

language of work or name

English

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publication date

17 October 2008

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3 August 2017

13

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inferred from page(s)

published in

Nucleic Acids Research

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3 August 2017

36

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3 August 2017

6558-6570

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3 August 2017

20

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Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre

3 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

DNA looping and translocation provide an optimal cleavage mechanism for the type III restriction enzymes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Fast-scan atomic force microscopy reveals that the type III restriction enzyme EcoP15I is capable of DNA translocation and looping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

PROMALS: towards accurate multiple sequence alignments of distantly related proteins.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Restriction endonucleases that bridge and excise two recognition sites from DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

REBASE--enzymes and genes for DNA restriction and modification

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Unidirectional translocation from recognition site and a necessary interaction with DNA end for cleavage by Type III restriction enzyme

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Purification and characterisation of a novel DNA methyltransferase, M.AhdI

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Using the transcriptome to annotate the genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Beyond Watson and Crick: DNA methylation and molecular enzymology of DNA methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Many type IIs restriction endonucleases interact with two recognition sites before cleaving DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Structure and function of type II restriction endonucleases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

FokI dimerization is required for DNA cleavage

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

How to measure and predict the molar absorption coefficient of a protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Use of specific oligonucleotide duplexes to stimulate cleavage of refractory DNA sites by restriction endonucleases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Isolation and computer-aided characterization of MmeI, a type II restriction endonuclease from Methylophilus methylotrophus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Predictive motifs derived from cytosine methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Class-IIS restriction enzymes--a review

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

M.EcoPl5 methylates the second adenine in its recognition sequence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Amino acid sequence arrangements of DNA-methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Cloning and sequence analysis of the genes coding for Eco57I type IV restriction-modification enzymes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Purification and properties of the Eco57I restriction endonuclease and methylase--prototypes of a new class (type IV)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Binding of MmeI restriction-modification enzyme to its specific recognition sequence is stimulated by S-adenosyl-L-methionine.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Engineering of restriction endonucleases: using methylation activity of the bifunctional endonuclease Eco57I to select the mutant with a novel sequence specificity

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Type III restriction enzymes need two inversely oriented recognition sites for DNA cleavage

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2582602

Construction of an efficient overproducer clone of HinfI restriction endonuclease using the polymerase chain reaction

26 October 2018

1 reference

12 December 2020

MmeI, a class-IIS restriction endonuclease: purification and characterization

1 reference

12 December 2020

Crystallization and preliminary X-ray analysis of restriction endonuclease FokI bound to DNA

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12 December 2020

Two intertwined methylation activities of the MmeI restriction-modification class-IIS system from Methylophilus methylotrophus

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12 December 2020

FokI requires two specific DNA sites for cleavage

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12 December 2020

DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKN711

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3 August 2017

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3 August 2017

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