An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding protein (Q34592533)

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English	An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding protein	scientific article

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scholarly article

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Europe PubMed Central

3 August 2017

An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding protein (English)

1 reference

Europe PubMed Central

3 August 2017

Mikhail Ponomarenko

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Mikhail Ponomarenko

5

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Nikolay Kolchanov

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Nikolay Kolchanov

6

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author name string

Ludmila Savinkova

1

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Europe PubMed Central

3 August 2017

Irina Drachkova

2

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Europe PubMed Central

3 August 2017

Tatyana Arshinova

3

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Europe PubMed Central

3 August 2017

Petr Ponomarenko

4

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Europe PubMed Central

3 August 2017

language of work or name

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publication date

12 February 2013

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Europe PubMed Central

3 August 2017

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Europe PubMed Central

3 August 2017

8

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Europe PubMed Central

3 August 2017

2

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Europe PubMed Central

3 August 2017

e54626

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Europe PubMed Central

3 August 2017

copyright license

Creative Commons Attribution 4.0 International

12 February 2013

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April 2022 Public Data File from Crossref

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Structure and basal transcription complex of RNA polymerase II core promoters in the mammalian genome: an overview

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Regulation of gene expression via the core promoter and the basal transcriptional machinery.

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Alpha and beta thalassemia

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Mining for SNPs and SSRs using SNPServer, dbSNP and SSR taxonomy tree

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TATA box polymorphisms in human gene promoters and associated hereditary pathologies.

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Hemoglobin research and the origins of molecular medicine.

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Identification of triosephosphate isomerase as an anti-drug resistance agent in human gastric cancer cells using functional proteomic analysis

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Triosephosphate isomerase deficiency: facts and doubts

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Diversity of the MBL2 gene in various Brazilian populations and the case of selection at the mannose-binding lectin locus

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Non-optimal TATA elements exhibit diverse mechanistic consequences

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A regulatory SNP causes a human genetic disease by creating a new transcriptional promoter

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TBP flanking sequences: asymmetry of binding, long-range effects and consensus sequences

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The role of the mannose-binding lectin in innate immunity

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Impact of mannose-binding lectin on susceptibility to infectious diseases.

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7 July 2018

Interleukin-1beta gene polymorphisms associated with hepatocellular carcinoma in hepatitis C virus infection.

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Comparison of TATA-binding protein recognition of a variant and consensus DNA promoters

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7 July 2018

CYP2A6: a human coumarin 7-hydroxylase

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7 July 2018

Ancestral origin of variation in the triosephosphate isomerase gene promoter

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7 July 2018

Periodical distribution of transcription factor sites in promoter regions and connection with chromatin structure

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7 July 2018

How proteins recognize the TATA box

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7 July 2018

Molecular analysis of a series of alleles in humans with reduced activity at the triosephosphate isomerase locus

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7 July 2018

The amino-terminal tails of the core histones and the translational position of the TATA box determine TBP/TFIIA association with nucleosomal DNA.

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Structural biology of tissue factor, the initiator of thrombogenesis in vivo

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7 July 2018

Purification of the human TATA-binding protein, TBP.

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7 July 2018

TBP binding and the rate of transcription initiation from the human beta-globin gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

beta-Thalassemia in American Blacks: novel mutations in the "TATA" box and an acceptor splice site

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

ATA box transcription mutation in beta-thalassemia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

Beta-thalassemia due to a T----A mutation within the ATA box.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

A new TATA box mutation detected at prenatal diagnosis for beta-thalassemia

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

Yeast TATA-binding protein TFIID binds to TATA elements with both consensus and nonconsensus DNA sequences.

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7 July 2018

Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences

1 reference

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Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro

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7 July 2018

Disruption of a binding site for hepatocyte nuclear factor 4 results in hemophilia B Leyden

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A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570547

7 July 2018

TATA-flanking sequences influence the rate and stability of TATA-binding protein and TFIIB binding

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0054626

21 January 2018

Polymorphisms of the interleukin-1 beta gene are associated with increased risk of non-small cell lung cancer.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0054626

21 January 2018

Haplotypic relationship between SNP and microsatellite markers at the NOS2A locus in two populations

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0054626

21 January 2018

Polymorphisms in the 5' regulatory region of the tissue factor gene and the risk of myocardial infarction and venous thromboembolism: the ECTIM and PATHROS studies. Etude Cas-Témoins de l'Infarctus du Myocarde. Paris Thrombosis case-control Study.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0054626

21 January 2018

Identification of sequence-dependent DNA features correlating to activity of DNA sites interacting with proteins.

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21 January 2018

A step-by-step model of TBP/TATA box binding allows predicting human hereditary diseases by single nucleotide polymorphism

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21 January 2018

Recognition of NFATp/AP-1 composite elements within genes induced upon the activation of immune cells

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21 January 2018

Characterization of a new polymorphism, IVS-I-108 (T-->C), and a new beta-thalassemia mutation, -27 (A-->T), discovered in the course of a prenatal diagnosis

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The stability of the TFIIA-TBP-DNA complex is dependent on the sequence of the TATAAA element

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

beta-Thalassemia in a Kurdish Jew. Single base changes in the T-A-T-A box

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel mutation in the TATA box in a Japanese patient with beta +-thalassemia

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for functional binding and stable sliding of the TATA binding protein on nonspecific DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Interaction of proteins from general transcription complex RNA polymerase II with oligoribonucleotides]

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two new delta-globin mutations: Hb A2-Ninive [delta133(H11)Val-Ala] and a delta(+)-thalassemia mutation [-31 (A --> G)] in the TATA box of the delta-globin gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of a genetic defect in the TATA box of the SOD1 gene in a patient with familial amyotrophic lateral sclerosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424617

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0054626

1 reference

Europe PubMed Central

3 August 2017

2013PLoSO...854626S

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release_zqlso5wusvbcrbmpixot4cmhmi

1 reference

https://api.fatcat.wiki/v0/release/zqlso5wusvbcrbmpixot4cmhmi

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

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