CySBGN: a Cytoscape plug-in to integrate SBGN maps (Q34549678)

3 August 2017

1 reference

title

CySBGN: a Cytoscape plug-in to integrate SBGN maps (English)

1 reference

3 August 2017

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Emanuel Gonçalves

1

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Martijn P van Iersel

object named as

Martijn van Iersel

series ordinal

2

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Julio Saez-Rodriguez

object named as

Julio Saez-Rodriguez

series ordinal

3

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publication date

16 January 2013

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3 August 2017

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3 August 2017

14

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3 August 2017

1

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page(s)

17

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PubMed ID

23324051

describes a project that uses

3 August 2017

Cytoscape

object named as

Cytoscape

3 references

inferred from title

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-14-17

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cites work

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A travel guide to Cytoscape plugins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

Software support for SBGN maps: SBGN-ML and LibSBGN.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

Exploring and exploiting disease interactions from multi-relational gene and phenotype networks.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

Cytoscape 2.8: new features for data integration and network visualization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

The BioPAX community standard for pathway data sharing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

Editing, validating and translating of SBGN maps

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

The Systems Biology Graphical Notation

7 July 2018

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Presenting and exploring biological pathways with PathVisio

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

VANTED: a system for advanced data analysis and visualization in the context of biological networks

7 July 2018

1 reference

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Systems biology markup language: Level 2 and beyond

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3599859

Cytoscape: a software environment for integrated models of biomolecular interaction networks

7 July 2018

1 reference

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A basis for a visual language for describing, archiving and analyzing functional models of complex biological systems

7 July 2018

1 reference

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The visual display of regulatory information and networks

7 July 2018

1 reference

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NetMatch: a Cytoscape plugin for searching biological networks

7 July 2018

1 reference

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BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks

21 January 2018

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Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-14-17

Using process diagrams for the graphical representation of biological networks

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23324051

12 December 2020

inferred from PubMed ID database lookup

CySBML: a Cytoscape plugin for SBML

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23324051

12 December 2020

inferred from PubMed ID database lookup

Spindles get the ran around

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1186/1471-2105-14-17

Identifiers

DOI

10.1186/1471-2105-14-17

1 reference

journals/bmcbi/GoncalvesIS13

3 August 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

3 August 2017

1 reference

PubMed ID

23324051